Gene annotation
Transcriptome id Sobic.001G470200.2
Synonym Sb01g044070
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt A0A1Z5SB19 , C5WUP3
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16442 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os03g10030.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001225
Brachypodium PNT77978 , PNT77979 , KQK23139
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G470200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
4 Sobic.007G032100 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
5 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
6 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
7 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
8 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
9 Sobic.001G434100 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
10 Sobic.002G315500 ankyrin repeat domain containing protein, expressed -
11 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
12 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.001G199400 monocopper oxidase, putative, expressed -
14 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
16 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
19 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
20 Sobic.001G493900 beta-galactosidase, putative, expressed -


Gene co-expression network
sample Sobic001G470200 Sobic001G470200 Sobic004G357000 Sobic004G357000 Sobic001G470200--Sobic004G357000 Sobic004G317200 Sobic004G317200 Sobic001G470200--Sobic004G317200 Sobic010G020600 Sobic010G020600 Sobic001G470200--Sobic010G020600 Sobic007G032100 Sobic007G032100 Sobic001G470200--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic001G470200--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G470200--Sobic004G274600 Sobic003G089300 Sobic003G089300 Sobic001G470200--Sobic003G089300 Sobic008G097700 Sobic008G097700 Sobic001G470200--Sobic008G097700 Sobic001G434100 Sobic001G434100 Sobic001G470200--Sobic001G434100 Sobic007G211200 Sobic007G211200 Sobic004G357000--Sobic007G211200 Sobic003G113500 Sobic003G113500 Sobic004G357000--Sobic003G113500 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic004G357000--Sobic004G248100 Sobic002G032500 Sobic002G032500 Sobic004G357000--Sobic002G032500 Sobic005G129600 Sobic005G129600 Sobic004G357000--Sobic005G129600 Sobic004G357000--Sobic001G470200 Sobic004G211700 Sobic004G211700 Sobic004G357000--Sobic004G211700 Sobic004G317200--Sobic010G020600 Sobic004G317200--Sobic004G357000 Sobic004G317200--Sobic001G470200 Sobic004G317200--Sobic003G089300 Sobic001G390400 Sobic001G390400 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic004G317200--Sobic007G211200 Sobic007G160300 Sobic007G160300 Sobic004G317200--Sobic007G160300 Sobic006G058000 Sobic006G058000 Sobic004G317200--Sobic006G058000 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic010G020600--Sobic003G339600 Sobic003G070600 Sobic003G070600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic010G020600--Sobic008G097700 Sobic001G221900 Sobic001G221900 Sobic010G020600--Sobic001G221900 Sobic001G286700 Sobic001G286700 Sobic007G032100--Sobic001G286700 Sobic007G065300 Sobic007G065300 Sobic007G032100--Sobic007G065300 Sobic007G032100--Sobic001G470200 Sobic007G032100--Sobic001G434100 Sobic007G032100--Sobic007G165800 Sobic005G032600 Sobic005G032600 Sobic007G032100--Sobic005G032600 Sobic001G199400 Sobic001G199400 Sobic007G032100--Sobic001G199400 Sobic003G338700 Sobic003G338700 Sobic007G032100--Sobic003G338700 Sobic007G032100--Sobic004G274600 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G180200 Sobic007G180200 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic004G274600--Sobic007G165800 Sobic004G274600--Sobic004G211700 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic003G089300--Sobic007G211200 Sobic009G060800 Sobic009G060800 Sobic003G089300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic003G089300--Sobic010G192500 Sobic003G089300--Sobic002G032500 Sobic003G089300--Sobic004G357000 Sobic003G089300--Sobic007G160300 Sobic003G089300--Sobic001G286700 Sobic003G089300--Sobic004G211700 Sobic001G155700 Sobic001G155700 Sobic003G089300--Sobic001G155700 Sobic008G097700--Sobic004G274600 Sobic008G097700--Sobic010G020600 Sobic008G097700--Sobic003G089300 Sobic008G097700--Sobic004G211700 Sobic008G097700--Sobic001G470200 Sobic008G097700--Sobic002G032500 Sobic008G097700--Sobic003G070600 Sobic008G097700--Sobic007G160300 Sobic003G300400 Sobic003G300400 Sobic008G097700--Sobic003G300400 Sobic001G434100--Sobic007G165800 Sobic001G434100--Sobic004G274600 Sobic001G434100--Sobic001G286700 Sobic001G434100--Sobic003G027100 Sobic001G434100--Sobic001G199400 Sobic001G434100--Sobic001G470200 Sobic001G434100--Sobic007G032100 Sobic001G434100--Sobic010G235300 Sobic001G434100--Sobic004G357000
Octagon: transcription factors


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