Gene annotation
Transcriptome id Sobic.001G493900.1
Synonym BGAL3, Sb01g046160
Functional annotation beta-galactosidase, putative, expressed
UniProt C5WWV7
Pfam PF02140 PF01301
Panther DB PTHR23421 PTHR23421:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G36360 : beta-galactosidase 3
RAP-DB (Rice) LOC_Os03g06940.1 : beta-galactosidase, putative, expressed
MaizeGDB (Corn) Zm00025a000807 , Zm00025a053462 , Zm00025a029271
Brachypodium KQK23472
Barley HORVU4Hr1G074280.9 , HORVU4Hr1G074280.8 , HORVU4Hr1G074280.6 , HORVU4Hr1G074280.4 , HORVU4Hr1G074280.3 , HORVU4Hr1G074280.2 , HORVU4Hr1G074280.13 , HORVU4Hr1G074280.11 , HORVU4Hr1G074280.10 , HORVU4Hr1G074280.1
Wheat TraesCS4D02G279400 , TraesCS4D02G279400 , TraesCS4D02G279400 , TraesCS4D02G279400 , TraesCS4A02G022500 , TraesCS4A02G022500 , TraesCS4B02G280900
Populus PNT41509 , PNT41510


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
2 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
5 Sobic.008G114900 rhoGAP domain containing protein, expressed -
6 Sobic.001G155700 expansin precursor, putative, expressed -
7 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
8 Sobic.002G417000 expressed protein -
9 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G219500 remorin family protein, putative, expressed -
11 Sobic.002G360500 expressed protein -
12 Sobic.003G307200 expressed protein -
13 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
14 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
15 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
16 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
17 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
18 Sobic.010G014500 aspartic protease, putative, expressed -
19 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
20 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2


Gene co-expression network
sample Sobic001G493900 Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G493900--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic001G493900--Sobic001G155700 Sobic010G192500 Sobic010G192500 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic006G274200 Sobic006G274200 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic008G151600 Sobic008G151600 Sobic003G019900--Sobic008G151600 Sobic007G147200 Sobic007G147200 Sobic003G019900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G019900--Sobic010G014500 Sobic006G163300 Sobic006G163300 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic003G019900--Sobic004G267600 Sobic002G313000 Sobic002G313000 Sobic010G129700--Sobic002G313000 Sobic009G184200 Sobic009G184200 Sobic010G129700--Sobic009G184200 Sobic001G398400 Sobic001G398400 Sobic010G129700--Sobic001G398400 Sobic003G260700 Sobic003G260700 Sobic010G129700--Sobic003G260700 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic010G129700--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G129700--Sobic007G116800 Sobic008G006800 Sobic008G006800 Sobic010G129700--Sobic008G006800 Sobic002G319300--Sobic001G155700 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic002G319300--Sobic010G192500 Sobic001G008300 Sobic001G008300 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic006G219500 Sobic006G219500 Sobic002G319300--Sobic006G219500 Sobic008G125700 Sobic008G125700 Sobic008G114900--Sobic008G125700 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic001G155700--Sobic006G219500 Sobic001G155700--Sobic002G313000 Sobic003G089300 Sobic003G089300 Sobic001G155700--Sobic003G089300 Sobic002G394500 Sobic002G394500 Sobic001G155700--Sobic002G394500 Sobic007G160300 Sobic007G160300 Sobic001G155700--Sobic007G160300 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic002G360500 Sobic002G360500 Sobic002G417000--Sobic002G360500 Sobic002G417000--Sobic001G493900 Sobic002G417000--Sobic004G267600 Sobic002G417000--Sobic003G307200 Sobic002G417000--Sobic008G114900 Sobic010G211800 Sobic010G211800 Sobic002G417000--Sobic010G211800 Sobic002G417000--Sobic010G192500 Sobic002G074000 Sobic002G074000 Sobic002G417000--Sobic002G074000 Sobic002G417000--Sobic006G221800 Sobic009G146700 Sobic009G146700 Sobic003G338700--Sobic009G146700 Sobic005G199700 Sobic005G199700 Sobic003G338700--Sobic005G199700 Sobic003G338700--Sobic010G014500 Sobic010G014700 Sobic010G014700 Sobic003G338700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G338700--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic003G338700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G338700--Sobic003G019900
Octagon: transcription factors


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