Gene annotation
Transcriptome id Sobic.001G522300.1
Synonym Sb01g048690
Functional annotation leucine-rich repeat transmembrane protein kinase, putative, expressed
UniProt C5X001
Pfam PF08263 PF00069
Panther DB PTHR27000 PTHR27000:SF7
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G12460 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os03g03570.2 : leucine-rich repeat transmembrane protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a053474 , Zm00025a000366
Brachypodium KQK23870
Barley HORVU4Hr1G003680.1 , HORVU4Hr1G083020.1 , HORVU4Hr1G083020.3 , HORVU4Hr1G083020.2 , HORVU4Hr1G083020.5 , HORVU4Hr1G083020.4 , HORVU4Hr1G083020.7 , HORVU4Hr1G083020.6 , HORVU3Hr1G116330.2 , HORVU3Hr1G116330.1
Wheat TraesCS4D02G317100 , TraesCS5A02G491400 , TraesCS4B02G320600 , TraesCS4B02G320600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.007G116800 BURP domain containing protein, expressed -
3 Sobic.001G493900 beta-galactosidase, putative, expressed -
4 Sobic.003G031700 protein kinase family protein, putative, expressed -
5 Sobic.002G362700 zinc finger family protein, putative, expressed -
6 Sobic.001G286400 - -
7 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
8 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
9 Sobic.004G283800 dehydration response related protein, putative, expressed -
10 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.010G014700 expressed protein -
12 Sobic.007G180200 NC domain-containing protein, putative, expressed -
13 Sobic.010G014500 aspartic protease, putative, expressed -
14 Sobic.009G099150 - -
15 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
17 Sobic.001G199400 monocopper oxidase, putative, expressed -
18 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
19 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
20 Sobic.002G045200 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G522300 Sobic001G522300 Sobic001G074000 Sobic001G074000 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G493900 Sobic001G493900 Sobic001G522300--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic009G129700 Sobic009G129700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic001G074000--Sobic001G522300 Sobic003G070600 Sobic003G070600 Sobic001G074000--Sobic003G070600 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic001G074000--Sobic001G199400 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic010G020600 Sobic010G020600 Sobic001G074000--Sobic010G020600 Sobic007G087800 Sobic007G087800 Sobic007G116800--Sobic007G087800 Sobic010G129700 Sobic010G129700 Sobic007G116800--Sobic010G129700 Sobic007G116800--Sobic001G522300 Sobic003G260700 Sobic003G260700 Sobic007G116800--Sobic003G260700 Sobic002G313000 Sobic002G313000 Sobic007G116800--Sobic002G313000 Sobic010G092400 Sobic010G092400 Sobic007G116800--Sobic010G092400 Sobic008G114900 Sobic008G114900 Sobic007G116800--Sobic008G114900 Sobic009G184200 Sobic009G184200 Sobic007G116800--Sobic009G184200 Sobic004G257600 Sobic004G257600 Sobic007G116800--Sobic004G257600 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic001G493900--Sobic003G019900 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic001G493900--Sobic001G155700 Sobic010G192500 Sobic010G192500 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic003G031700--Sobic002G362700 Sobic002G320600 Sobic002G320600 Sobic003G031700--Sobic002G320600 Sobic006G193100 Sobic006G193100 Sobic003G031700--Sobic006G193100 Sobic001G074100 Sobic001G074100 Sobic003G031700--Sobic001G074100 Sobic009G202801 Sobic009G202801 Sobic003G031700--Sobic009G202801 Sobic003G031700--Sobic001G522300 Sobic001G008300 Sobic001G008300 Sobic003G031700--Sobic001G008300 Sobic010G211800 Sobic010G211800 Sobic003G031700--Sobic010G211800 Sobic003G031700--Sobic007G087800 Sobic002G362700--Sobic003G031700 Sobic002G362700--Sobic001G074100 Sobic002G362700--Sobic001G522300 Sobic004G164700 Sobic004G164700 Sobic002G362700--Sobic004G164700 Sobic010G241100 Sobic010G241100 Sobic002G362700--Sobic010G241100 Sobic003G032200 Sobic003G032200 Sobic002G362700--Sobic003G032200 Sobic002G362700--Sobic010G211800 Sobic003G338200 Sobic003G338200 Sobic002G362700--Sobic003G338200 Sobic002G045200 Sobic002G045200 Sobic002G362700--Sobic002G045200 Sobic001G286400--Sobic001G522300 Sobic010G014500 Sobic010G014500 Sobic001G286400--Sobic010G014500 Sobic001G286400--Sobic001G074000 Sobic001G286400--Sobic010G014700 Sobic001G286400--Sobic010G092400 Sobic001G286400--Sobic009G129700 Sobic001G286400--Sobic007G116800 Sobic006G270500 Sobic006G270500 Sobic001G286400--Sobic006G270500 Sobic002G222500 Sobic002G222500 Sobic001G286400--Sobic002G222500 Sobic006G125800 Sobic006G125800 Sobic009G235700--Sobic006G125800 Sobic009G235700--Sobic010G020600 Sobic001G221900 Sobic001G221900 Sobic009G235700--Sobic001G221900 Sobic004G248100 Sobic004G248100 Sobic009G235700--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic009G235700--Sobic003G339600 Sobic009G235700--Sobic001G522300 Sobic007G165800 Sobic007G165800 Sobic009G235700--Sobic007G165800 Sobic009G235700--Sobic004G283800 Sobic003G360700 Sobic003G360700 Sobic009G235700--Sobic003G360700 Sobic009G129700--Sobic001G074000 Sobic001G298800 Sobic001G298800 Sobic009G129700--Sobic001G298800 Sobic009G129700--Sobic001G522300 Sobic009G129700--Sobic003G019900 Sobic005G104100 Sobic005G104100 Sobic009G129700--Sobic005G104100 Sobic009G129700--Sobic003G070600 Sobic003G283400 Sobic003G283400 Sobic009G129700--Sobic003G283400 Sobic009G129700--Sobic001G199400 Sobic009G129700--Sobic003G360700 Sobic001G207600 Sobic001G207600 Sobic004G283800--Sobic001G207600 Sobic004G274600 Sobic004G274600 Sobic004G283800--Sobic004G274600 Sobic004G283800--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic004G283800--Sobic002G229700 Sobic004G283800--Sobic003G070600 Sobic004G283800--Sobic010G020600 Sobic004G283800--Sobic009G235700 Sobic004G357000 Sobic004G357000 Sobic004G283800--Sobic004G357000 Sobic003G113500 Sobic003G113500 Sobic004G283800--Sobic003G113500
Octagon: transcription factors


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