Gene annotation
Transcriptome id Sobic.007G160300.1
Synonym 1, ATCYCD2, Sb07g023350, CYCD2
Functional annotation cyclin, putative, expressed
UniProt C5YMN9
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF218
NCBI CDD KOG0656; G1/S-specific cyclin D
KEGG Orthology K18810; cyclin D1/2/4, plant
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G65420 : CYCLIN D4;1
RAP-DB (Rice) LOC_Os08g37390.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a024014 , Zm00025a005468 , Zm00025a031220
Brachypodium KQJ98683
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G160300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
2 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
3 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
4 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
5 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
7 Sobic.001G155700 expansin precursor, putative, expressed -
8 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.001G493900 beta-galactosidase, putative, expressed -
10 Sobic.001G008300 expressed protein -
11 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
12 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
14 Sobic.001G390400 expressed protein -
15 Sobic.004G248100 endoglucanase, putative, expressed -
16 Sobic.010G241100 thaumatin family domain containing protein, expressed -
17 Sobic.006G142500 protein kinase, putative, expressed -
18 Sobic.006G219500 remorin family protein, putative, expressed -
19 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
20 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -


Gene co-expression network
sample Sobic007G160300 Sobic007G160300 Sobic003G089300 Sobic003G089300 Sobic007G160300--Sobic003G089300 Sobic003G070600 Sobic003G070600 Sobic007G160300--Sobic003G070600 Sobic006G058000 Sobic006G058000 Sobic007G160300--Sobic006G058000 Sobic010G020600 Sobic010G020600 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic003G309400 Sobic003G309400 Sobic007G160300--Sobic003G309400 Sobic001G155700 Sobic001G155700 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic001G493900 Sobic001G493900 Sobic007G160300--Sobic001G493900 Sobic007G211200 Sobic007G211200 Sobic003G089300--Sobic007G211200 Sobic009G060800 Sobic009G060800 Sobic003G089300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic003G089300--Sobic010G192500 Sobic002G032500 Sobic002G032500 Sobic003G089300--Sobic002G032500 Sobic003G089300--Sobic004G357000 Sobic003G089300--Sobic007G160300 Sobic001G286700 Sobic001G286700 Sobic003G089300--Sobic001G286700 Sobic004G211700 Sobic004G211700 Sobic003G089300--Sobic004G211700 Sobic003G089300--Sobic001G155700 Sobic003G070600--Sobic001G074000 Sobic003G070600--Sobic010G020600 Sobic003G070600--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic003G070600--Sobic001G199400 Sobic003G113500 Sobic003G113500 Sobic003G070600--Sobic003G113500 Sobic001G221900 Sobic001G221900 Sobic003G070600--Sobic001G221900 Sobic004G274600 Sobic004G274600 Sobic003G070600--Sobic004G274600 Sobic004G283800 Sobic004G283800 Sobic003G070600--Sobic004G283800 Sobic004G248100 Sobic004G248100 Sobic003G070600--Sobic004G248100 Sobic006G058000--Sobic007G160300 Sobic006G058000--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic006G058000--Sobic010G078700 Sobic006G058000--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic006G058000--Sobic004G317200 Sobic006G058000--Sobic003G089300 Sobic001G390400 Sobic001G390400 Sobic006G058000--Sobic001G390400 Sobic001G470200 Sobic001G470200 Sobic006G058000--Sobic001G470200 Sobic008G097700 Sobic008G097700 Sobic006G058000--Sobic008G097700 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic010G020600--Sobic003G339600 Sobic010G020600--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic010G020600--Sobic009G235700 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic010G020600--Sobic008G097700 Sobic010G020600--Sobic001G221900 Sobic001G522300 Sobic001G522300 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic003G309400--Sobic003G300400 Sobic003G309400--Sobic002G032500 Sobic003G309400--Sobic004G248100 Sobic003G338200 Sobic003G338200 Sobic003G309400--Sobic003G338200 Sobic009G254500 Sobic009G254500 Sobic003G309400--Sobic009G254500 Sobic007G094200 Sobic007G094200 Sobic003G309400--Sobic007G094200 Sobic002G229700 Sobic002G229700 Sobic003G309400--Sobic002G229700 Sobic009G141300 Sobic009G141300 Sobic003G309400--Sobic009G141300 Sobic002G011000 Sobic002G011000 Sobic003G309400--Sobic002G011000 Sobic002G319300 Sobic002G319300 Sobic001G155700--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic006G219500 Sobic006G219500 Sobic001G155700--Sobic006G219500 Sobic002G313000 Sobic002G313000 Sobic001G155700--Sobic002G313000 Sobic001G155700--Sobic003G089300 Sobic002G394500 Sobic002G394500 Sobic001G155700--Sobic002G394500 Sobic001G155700--Sobic007G160300 Sobic004G357000--Sobic007G211200 Sobic004G357000--Sobic003G113500 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G357000--Sobic004G248100 Sobic004G357000--Sobic002G032500 Sobic005G129600 Sobic005G129600 Sobic004G357000--Sobic005G129600 Sobic004G357000--Sobic001G470200 Sobic004G357000--Sobic004G211700 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700
Octagon: transcription factors


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