Gene annotation
Transcriptome id Sobic.001G008300.1,Sobic.001G008300.2
Synonym Sb01g000830
Functional annotation expressed protein
UniProt C5WS09
Pfam -
Panther DB PTHR21596:SF8 PTHR21596
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45900 : Ribonuclease P protein subunit P38-related
RAP-DB (Rice) LOC_Os03g63660.1 : expressed protein
MaizeGDB (Corn) Zm00025a009083
Brachypodium KQK12044
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
2 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
3 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
4 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
5 Sobic.001G155700 expansin precursor, putative, expressed -
6 Sobic.001G390400 expressed protein -
7 Sobic.003G031700 protein kinase family protein, putative, expressed -
8 Sobic.001G493900 beta-galactosidase, putative, expressed -
9 Sobic.009G202801 - K10406: kinesin family member C2/C3
10 Sobic.006G142500 protein kinase, putative, expressed -
11 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
12 Sobic.002G074000 expressed protein -
13 Sobic.003G307200 expressed protein -
14 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
15 Sobic.001G026800 polygalacturonase, putative, expressed -
16 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -
17 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
18 Sobic.006G219500 remorin family protein, putative, expressed -
19 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
20 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -


Gene co-expression network
sample Sobic001G008300 Sobic001G008300 Sobic002G319300 Sobic002G319300 Sobic001G008300--Sobic002G319300 Sobic006G193100 Sobic006G193100 Sobic001G008300--Sobic006G193100 Sobic007G160300 Sobic007G160300 Sobic001G008300--Sobic007G160300 Sobic010G192500 Sobic010G192500 Sobic001G008300--Sobic010G192500 Sobic001G155700 Sobic001G155700 Sobic001G008300--Sobic001G155700 Sobic001G390400 Sobic001G390400 Sobic001G008300--Sobic001G390400 Sobic003G031700 Sobic003G031700 Sobic001G008300--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic001G008300--Sobic001G493900 Sobic009G202801 Sobic009G202801 Sobic001G008300--Sobic009G202801 Sobic002G319300--Sobic001G155700 Sobic008G114900 Sobic008G114900 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G313000 Sobic002G313000 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic002G319300--Sobic010G192500 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic006G219500 Sobic006G219500 Sobic002G319300--Sobic006G219500 Sobic006G193100--Sobic003G031700 Sobic006G193100--Sobic001G008300 Sobic006G193100--Sobic009G202801 Sobic003G315700 Sobic003G315700 Sobic006G193100--Sobic003G315700 Sobic004G328300 Sobic004G328300 Sobic006G193100--Sobic004G328300 Sobic008G148000 Sobic008G148000 Sobic006G193100--Sobic008G148000 Sobic006G193100--Sobic002G319300 Sobic009G136000 Sobic009G136000 Sobic006G193100--Sobic009G136000 Sobic002G204400 Sobic002G204400 Sobic006G193100--Sobic002G204400 Sobic003G089300 Sobic003G089300 Sobic007G160300--Sobic003G089300 Sobic003G070600 Sobic003G070600 Sobic007G160300--Sobic003G070600 Sobic006G058000 Sobic006G058000 Sobic007G160300--Sobic006G058000 Sobic010G020600 Sobic010G020600 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic003G309400 Sobic003G309400 Sobic007G160300--Sobic003G309400 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic007G160300--Sobic001G493900 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic001G155700--Sobic002G319300 Sobic001G155700--Sobic008G114900 Sobic001G155700--Sobic001G493900 Sobic001G155700--Sobic010G192500 Sobic001G155700--Sobic006G219500 Sobic001G155700--Sobic002G313000 Sobic001G155700--Sobic003G089300 Sobic002G394500 Sobic002G394500 Sobic001G155700--Sobic002G394500 Sobic001G155700--Sobic007G160300 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic001G390400--Sobic004G317200 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic006G142500 Sobic006G142500 Sobic001G390400--Sobic006G142500 Sobic002G362700 Sobic002G362700 Sobic003G031700--Sobic002G362700 Sobic002G320600 Sobic002G320600 Sobic003G031700--Sobic002G320600 Sobic003G031700--Sobic006G193100 Sobic001G074100 Sobic001G074100 Sobic003G031700--Sobic001G074100 Sobic003G031700--Sobic009G202801 Sobic001G522300 Sobic001G522300 Sobic003G031700--Sobic001G522300 Sobic003G031700--Sobic001G008300 Sobic010G211800 Sobic010G211800 Sobic003G031700--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic003G031700--Sobic007G087800 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic003G292700 Sobic003G292700 Sobic009G202801--Sobic003G292700 Sobic009G202801--Sobic006G193100 Sobic009G202801--Sobic003G031700 Sobic009G202801--Sobic003G315700 Sobic009G202801--Sobic006G142500 Sobic009G202801--Sobic001G008300 Sobic002G074000 Sobic002G074000 Sobic009G202801--Sobic002G074000 Sobic002G317700 Sobic002G317700 Sobic009G202801--Sobic002G317700 Sobic004G246500 Sobic004G246500 Sobic009G202801--Sobic004G246500
Octagon: transcription factors


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