Gene annotation
Transcriptome id Sobic.004G267600.1
Synonym AtTLP2, Sb04g030550, TLP2
Functional annotation OsFBT4 - F-box and tubby domain containing protein, expressed
UniProt C5Y0B7
Pfam PF00646 PF01167
Panther DB PTHR16517 PTHR16517:SF41
NCBI CDD KOG2502; Tub family proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G18280 : tubby like protein 2
RAP-DB (Rice) LOC_Os02g47640.1 : OsFBT4 - F-box and tubby domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003607 , Zm00025a032462 , Zm00025a033670 , Zm00025a026715 , Zm00025a021720
Brachypodium KQJ94772 , KQK00939
Barley HORVU6Hr1G068970.7 , HORVU6Hr1G068970.5 , HORVU6Hr1G068970.6 , HORVU6Hr1G068970.2 , HORVU6Hr1G068970.3 , HORVU6Hr1G068970.1 , HORVU6Hr1G068970.4
Wheat TraesCS2B02G613800 , TraesCS2D02G584900 , TraesCS6B02G300200 , TraesCS6A02G272800 , TraesCS6A02G272800
Populus -


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cDNA sequences
Sobic.004G267600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G493900 beta-galactosidase, putative, expressed -
2 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
3 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
4 Sobic.006G142500 protein kinase, putative, expressed -
5 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
7 Sobic.002G417000 expressed protein -
8 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
9 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.008G070700 leafbladeless1, putative, expressed -
12 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
13 Sobic.008G114900 rhoGAP domain containing protein, expressed -
14 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.009G047000 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
16 Sobic.004G246500 ATMAP70 protein, putative, expressed -
17 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.001G398400 expressed protein -
19 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
20 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -


Gene co-expression network
sample Sobic004G267600 Sobic004G267600 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G493900--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic001G493900--Sobic001G155700 Sobic010G192500 Sobic010G192500 Sobic001G493900--Sobic010G192500 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic002G313000 Sobic002G313000 Sobic010G129700--Sobic002G313000 Sobic009G184200 Sobic009G184200 Sobic010G129700--Sobic009G184200 Sobic001G398400 Sobic001G398400 Sobic010G129700--Sobic001G398400 Sobic003G260700 Sobic003G260700 Sobic010G129700--Sobic003G260700 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic010G129700--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G129700--Sobic007G116800 Sobic008G006800 Sobic008G006800 Sobic010G129700--Sobic008G006800 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic002G006100 Sobic002G006100 Sobic002G027600--Sobic002G006100 Sobic002G027600--Sobic006G272800 Sobic002G027600--Sobic004G267600 Sobic002G027600--Sobic005G032600 Sobic002G027600--Sobic002G284100 Sobic002G027600--Sobic006G142500 Sobic002G027600--Sobic009G127800 Sobic003G351900 Sobic003G351900 Sobic002G027600--Sobic003G351900 Sobic001G079900 Sobic001G079900 Sobic002G027600--Sobic001G079900 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic002G360500 Sobic002G360500 Sobic002G417000--Sobic002G360500 Sobic002G417000--Sobic001G493900 Sobic002G417000--Sobic004G267600 Sobic003G307200 Sobic003G307200 Sobic002G417000--Sobic003G307200 Sobic002G417000--Sobic008G114900 Sobic010G211800 Sobic010G211800 Sobic002G417000--Sobic010G211800 Sobic002G417000--Sobic010G192500 Sobic002G074000 Sobic002G074000 Sobic002G417000--Sobic002G074000 Sobic006G221800 Sobic006G221800 Sobic002G417000--Sobic006G221800 Sobic005G032600--Sobic002G027600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic005G032600--Sobic003G019900 Sobic005G032600--Sobic006G272800 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic005G062600--Sobic003G019900
Octagon: transcription factors


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