Gene annotation
Transcriptome id Sobic.002G027600.1,Sobic.002G027600.3
Synonym Sb02g002450, BAM1
Functional annotation receptor protein kinase CLAVATA1 precursor, putative, expressed
UniProt Q9XE70 , C5X8V2
Pfam PF08263 PF00560 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF49
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G65700 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os07g04190.1 : receptor protein kinase CLAVATA1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008371 , Zm00025a016683 , Zm00025a044967
Brachypodium PNT77112 , PNT77111 , KQK12976 , KQK22738 , KQK20978
Barley HORVU5Hr1G098840.2 , HORVU5Hr1G098840.1 , HORVU2Hr1G061090.4 , HORVU2Hr1G061090.2 , HORVU2Hr1G061090.3 , HORVU2Hr1G061090.1
Wheat TraesCS2D02G255900 , TraesCS2A02G268300 , TraesCS5D02G417400 , TraesCS5A02G407500 , TraesCS5A02G407500 , TraesCS4A02G059000 , TraesCS5B02G412400 , TraesCS2B02G266700
Populus -


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cDNA sequences
Sobic.002G027600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
3 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
4 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
5 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
6 Sobic.006G142500 protein kinase, putative, expressed -
7 Sobic.009G127800 BZIP protein, putative, expressed -
8 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
9 Sobic.001G079900 expressed protein -
10 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.001G493900 beta-galactosidase, putative, expressed -
12 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
14 Sobic.006G221300 expressed protein -
15 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
18 Sobic.001G540700 expressed protein -
19 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
20 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G027600 Sobic002G027600 Sobic002G006100 Sobic002G006100 Sobic002G027600--Sobic002G006100 Sobic006G272800 Sobic006G272800 Sobic002G027600--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G027600--Sobic004G267600 Sobic005G032600 Sobic005G032600 Sobic002G027600--Sobic005G032600 Sobic002G284100 Sobic002G284100 Sobic002G027600--Sobic002G284100 Sobic006G142500 Sobic006G142500 Sobic002G027600--Sobic006G142500 Sobic009G127800 Sobic009G127800 Sobic002G027600--Sobic009G127800 Sobic003G351900 Sobic003G351900 Sobic002G027600--Sobic003G351900 Sobic001G079900 Sobic001G079900 Sobic002G027600--Sobic001G079900 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic002G006100--Sobic006G272800 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic005G032600--Sobic002G027600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic005G032600--Sobic006G272800 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic006G221300 Sobic006G221300 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic001G054700 Sobic001G054700 Sobic009G127800--Sobic001G054700 Sobic009G127800--Sobic006G142500 Sobic008G052300 Sobic008G052300 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic003G351900--Sobic006G142500 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic001G079900--Sobic003G351900 Sobic001G079900--Sobic001G493900 Sobic001G079900--Sobic008G151600 Sobic001G079900--Sobic002G027600 Sobic009G141700 Sobic009G141700 Sobic001G079900--Sobic009G141700
Octagon: transcription factors


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