Gene annotation
Transcriptome id Sobic.003G351900.1
Synonym SOS5, Sb03g039440
Functional annotation fasciclin-like arabinogalactan protein, putative, expressed
UniProt H0I4E0 , C5XPP1
Pfam PF02469
Panther DB PTHR32382 PTHR32382:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46550 : Fasciclin-like arabinogalactan family protein
RAP-DB (Rice) LOC_Os01g62380.1 : fasciclin-like arabinogalactan protein, putative, expressed
MaizeGDB (Corn) Zm00025a039683 , Zm00025a026915
Brachypodium KQK10516 , PNT73164
Barley HORVU3Hr1G086360.1 , HORVU3Hr1G086360.2 , HORVU3Hr1G086360.3 , HORVU3Hr1G086360.4
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G351900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G142500 protein kinase, putative, expressed -
2 Sobic.001G079900 expressed protein -
3 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
4 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
5 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G212600 a_IG002N01.7, putative, expressed -
7 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
8 Sobic.004G164700 expressed protein -
9 Sobic.001G395200 cyclin-related protein, putative, expressed -
10 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.001G369800 monocopper oxidase, putative, expressed -
12 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
13 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
14 Sobic.001G540700 expressed protein -
15 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
16 Sobic.010G024500 expressed protein -
17 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
18 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
19 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
20 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G351900 Sobic003G351900 Sobic006G142500 Sobic006G142500 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic002G006100 Sobic002G006100 Sobic003G351900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic010G086000 Sobic010G086000 Sobic006G142500--Sobic010G086000 Sobic004G267600 Sobic004G267600 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic005G062600 Sobic005G062600 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic001G079900--Sobic003G351900 Sobic001G493900 Sobic001G493900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic001G079900--Sobic002G027600 Sobic009G141700 Sobic009G141700 Sobic001G079900--Sobic009G141700 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic002G006100--Sobic009G225500 Sobic002G027600--Sobic002G006100 Sobic002G027600--Sobic006G272800 Sobic002G027600--Sobic004G267600 Sobic002G027600--Sobic005G032600 Sobic002G027600--Sobic002G284100 Sobic002G027600--Sobic006G142500 Sobic002G027600--Sobic009G127800 Sobic002G027600--Sobic003G351900 Sobic002G027600--Sobic001G079900 Sobic003G153900--Sobic003G351900 Sobic008G169400 Sobic008G169400 Sobic003G153900--Sobic008G169400 Sobic002G021200 Sobic002G021200 Sobic003G153900--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic003G153900--Sobic006G281900 Sobic003G153900--Sobic001G079900 Sobic002G370400 Sobic002G370400 Sobic003G153900--Sobic002G370400 Sobic001G369800 Sobic001G369800 Sobic003G153900--Sobic001G369800 Sobic009G212100 Sobic009G212100 Sobic003G153900--Sobic009G212100 Sobic006G008300 Sobic006G008300 Sobic003G153900--Sobic006G008300 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G212600--Sobic001G369800 Sobic001G296800 Sobic001G296800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic001G212600--Sobic005G062600 Sobic001G212600--Sobic002G006100 Sobic005G032600--Sobic002G027600 Sobic005G032600--Sobic004G267600 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic005G032600--Sobic006G272800 Sobic005G032600--Sobic001G493900 Sobic005G032600--Sobic008G151600 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic006G241800 Sobic006G241800 Sobic004G164700--Sobic006G241800 Sobic002G362700 Sobic002G362700 Sobic004G164700--Sobic002G362700 Sobic008G190000 Sobic008G190000 Sobic004G164700--Sobic008G190000 Sobic001G461800 Sobic001G461800 Sobic004G164700--Sobic001G461800 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic003G041900 Sobic003G041900 Sobic004G164700--Sobic003G041900 Sobic004G164700--Sobic001G425700 Sobic004G164700--Sobic010G086000 Sobic003G104100 Sobic003G104100 Sobic001G395200--Sobic003G104100 Sobic009G259900 Sobic009G259900 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic010G149600 Sobic010G149600 Sobic001G395200--Sobic010G149600 Sobic001G395200--Sobic003G351900 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic004G043750 Sobic004G043750 Sobic001G395200--Sobic004G043750 Sobic001G395200--Sobic001G079900
Octagon: transcription factors


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