Gene annotation
Transcriptome id Sobic.009G225500.1
Synonym Sb09g027870
Functional annotation serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed
UniProt C5YVD2
Pfam PF01603
Panther DB PTHR10257 PTHR10257:SF13
NCBI CDD -
KEGG Orthology K11584; serine/threonine-protein phosphatase 2A regulatory subunit B'
Gene Ontology GO:0007165; signal transduction GO:0000159protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT5G25510 : Protein phosphatase 2A regulatory B subunit family protein
RAP-DB (Rice) LOC_Os05g48150.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a036555 , Zm00025a044492
Brachypodium KQK04986 , KQJ94922
Barley HORVU7Hr1G074840.2 , HORVU7Hr1G074840.3 , HORVU7Hr1G074840.1 , HORVU1Hr1G084450.5 , HORVU1Hr1G084450.6 , HORVU1Hr1G084450.3
Wheat TraesCS7A02G313600 , TraesCS7A02G313600 , TraesCS1D02G390600 , TraesCS1B02G408600 , TraesCS7D02G310200 , TraesCS1A02G382900 , TraesCS1A02G382900 , TraesCS7B02G214300 , TraesCS7B02G214300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G225500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G127800 BZIP protein, putative, expressed -
2 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
3 Sobic.006G142500 protein kinase, putative, expressed -
4 Sobic.006G221300 expressed protein -
5 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
6 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
7 Sobic.004G179800 expressed protein -
8 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
9 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
10 Sobic.005G157300 protein binding protein, putative, expressed -
11 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
13 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
14 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
15 Sobic.005G153000 agenet domain containing protein, expressed -
16 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.008G118100 kelch repeat protein, putative, expressed -
18 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
19 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -


Gene co-expression network
sample Sobic009G225500 Sobic009G225500 Sobic009G127800 Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic006G142500 Sobic006G142500 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic001G425700 Sobic001G425700 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic006G281900 Sobic006G281900 Sobic009G225500--Sobic006G281900 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic001G054700 Sobic001G054700 Sobic009G127800--Sobic001G054700 Sobic009G127800--Sobic006G142500 Sobic008G052300 Sobic008G052300 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic002G027600 Sobic002G027600 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic003G259300--Sobic001G425700 Sobic003G259300--Sobic009G225500 Sobic002G006100 Sobic002G006100 Sobic003G259300--Sobic002G006100 Sobic003G259300--Sobic009G127800 Sobic003G259300--Sobic006G272800 Sobic005G153000 Sobic005G153000 Sobic003G259300--Sobic005G153000 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic006G142500--Sobic010G086000 Sobic004G267600 Sobic004G267600 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic009G077300 Sobic009G077300 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic006G221300--Sobic009G225500 Sobic006G221300--Sobic008G052300 Sobic010G086000--Sobic006G142500 Sobic010G086000--Sobic003G032200 Sobic010G241100 Sobic010G241100 Sobic010G086000--Sobic010G241100 Sobic001G452900 Sobic001G452900 Sobic010G086000--Sobic001G452900 Sobic010G086000--Sobic010G192500 Sobic010G086000--Sobic004G234500 Sobic010G086000--Sobic004G267600 Sobic002G284100 Sobic002G284100 Sobic010G086000--Sobic002G284100 Sobic010G086000--Sobic001G054700 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic001G425700--Sobic002G006100 Sobic003G024000 Sobic003G024000 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic001G425700--Sobic006G281900 Sobic001G425700--Sobic009G127800 Sobic004G179800--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G179800--Sobic010G024500 Sobic008G190000 Sobic008G190000 Sobic004G179800--Sobic008G190000 Sobic004G179800--Sobic009G225500 Sobic004G179800--Sobic010G192500 Sobic005G163400 Sobic005G163400 Sobic004G179800--Sobic005G163400 Sobic004G179800--Sobic003G104100 Sobic004G179800--Sobic009G047000 Sobic003G366000 Sobic003G366000 Sobic004G179800--Sobic003G366000 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic001G199500 Sobic001G199500 Sobic006G281900--Sobic001G199500 Sobic006G281900--Sobic001G425700 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic006G281900--Sobic003G024000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.