Gene annotation
Transcriptome id Sobic.008G052300.1,Sobic.008G052300.3,Sobic.008G052300.2
Synonym Sb08g004420
Functional annotation plant protein of unknown function DUF869 domain containing protein, expressed
UniProt A0A1B6PBM4
Pfam PF05911
Panther DB PTHR31580 PTHR31580:SF9
NCBI CDD KOG0978; E3 ubiquitin ligase involved in syntaxin degradation KOG4593Mitotic checkpoint protein MAD1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G77580 : Plant protein of unknown function (DUF869)
RAP-DB (Rice) LOC_Os12g07160.2,LOC_Os12g07160.1 : plant protein of unknown function DUF869 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033976 , Zm00025a025746 , Zm00025a054035
Brachypodium KQJ92070 , KQJ92071 , KQJ92072 , KQJ92073 , KQJ92074 , KQJ92075 , PNT65383 , PNT65384 , PNT65385
Barley -
Wheat TraesCS5A02G118700 , TraesCS5A02G118700 , TraesCS5D02G130100 , TraesCS5B02G117500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G269100 ATROPGEF7/ROPGEF7, putative, expressed -
2 Sobic.003G104100 expressed protein -
3 Sobic.009G127800 BZIP protein, putative, expressed -
4 Sobic.006G221300 expressed protein -
5 Sobic.005G163400 dnaJ domain containing protein, expressed -
6 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
8 Sobic.005G153000 agenet domain containing protein, expressed -
9 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.009G077300 protein kinase, putative, expressed -
11 Sobic.002G168000 expressed protein -
12 Sobic.005G092700 expressed protein -
13 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.009G207400 ATP binding protein, putative, expressed -
15 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
16 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
17 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.010G024500 expressed protein -
19 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
20 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -


Gene co-expression network
sample Sobic008G052300 Sobic008G052300 Sobic004G269100 Sobic004G269100 Sobic008G052300--Sobic004G269100 Sobic003G104100 Sobic003G104100 Sobic008G052300--Sobic003G104100 Sobic009G127800 Sobic009G127800 Sobic008G052300--Sobic009G127800 Sobic006G221300 Sobic006G221300 Sobic008G052300--Sobic006G221300 Sobic005G163400 Sobic005G163400 Sobic008G052300--Sobic005G163400 Sobic002G259200 Sobic002G259200 Sobic008G052300--Sobic002G259200 Sobic006G016700 Sobic006G016700 Sobic008G052300--Sobic006G016700 Sobic005G153000 Sobic005G153000 Sobic008G052300--Sobic005G153000 Sobic009G225500 Sobic009G225500 Sobic008G052300--Sobic009G225500 Sobic004G269100--Sobic008G052300 Sobic004G269100--Sobic002G259200 Sobic003G251700 Sobic003G251700 Sobic004G269100--Sobic003G251700 Sobic005G092700 Sobic005G092700 Sobic004G269100--Sobic005G092700 Sobic004G269100--Sobic005G153000 Sobic001G461800 Sobic001G461800 Sobic004G269100--Sobic001G461800 Sobic003G250000 Sobic003G250000 Sobic004G269100--Sobic003G250000 Sobic003G222800 Sobic003G222800 Sobic004G269100--Sobic003G222800 Sobic003G055800 Sobic003G055800 Sobic004G269100--Sobic003G055800 Sobic001G395200 Sobic001G395200 Sobic003G104100--Sobic001G395200 Sobic003G104100--Sobic008G052300 Sobic003G104100--Sobic005G163400 Sobic001G425700 Sobic001G425700 Sobic003G104100--Sobic001G425700 Sobic006G067700 Sobic006G067700 Sobic003G104100--Sobic006G067700 Sobic010G024500 Sobic010G024500 Sobic003G104100--Sobic010G024500 Sobic004G179800 Sobic004G179800 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic009G259900 Sobic009G259900 Sobic003G104100--Sobic009G259900 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic001G054700 Sobic001G054700 Sobic009G127800--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic009G127800--Sobic006G142500 Sobic009G127800--Sobic008G052300 Sobic002G279400 Sobic002G279400 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic002G027600 Sobic002G027600 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic009G077300 Sobic009G077300 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic006G221300--Sobic009G225500 Sobic006G221300--Sobic008G052300 Sobic005G163400--Sobic010G024500 Sobic001G390400 Sobic001G390400 Sobic005G163400--Sobic001G390400 Sobic005G163400--Sobic009G077300 Sobic005G163400--Sobic003G104100 Sobic005G163400--Sobic008G052300 Sobic008G190000 Sobic008G190000 Sobic005G163400--Sobic008G190000 Sobic005G163400--Sobic001G054700 Sobic005G163400--Sobic005G153000 Sobic002G050700 Sobic002G050700 Sobic005G163400--Sobic002G050700 Sobic002G259200--Sobic004G269100 Sobic002G259200--Sobic003G222800 Sobic001G493100 Sobic001G493100 Sobic002G259200--Sobic001G493100 Sobic002G259200--Sobic008G052300 Sobic006G172000 Sobic006G172000 Sobic002G259200--Sobic006G172000 Sobic002G286700 Sobic002G286700 Sobic002G259200--Sobic002G286700 Sobic002G259200--Sobic005G163400 Sobic006G041700 Sobic006G041700 Sobic002G259200--Sobic006G041700 Sobic002G259200--Sobic008G190000 Sobic003G147500 Sobic003G147500 Sobic006G016700--Sobic003G147500 Sobic006G275500 Sobic006G275500 Sobic006G016700--Sobic006G275500 Sobic002G256900 Sobic002G256900 Sobic006G016700--Sobic002G256900 Sobic006G226000 Sobic006G226000 Sobic006G016700--Sobic006G226000 Sobic007G050800 Sobic007G050800 Sobic006G016700--Sobic007G050800 Sobic002G168000 Sobic002G168000 Sobic006G016700--Sobic002G168000 Sobic007G187700 Sobic007G187700 Sobic006G016700--Sobic007G187700 Sobic006G016700--Sobic008G052300 Sobic006G016700--Sobic005G153000 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic009G225500--Sobic006G142500 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic009G225500--Sobic001G425700 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic006G281900 Sobic006G281900 Sobic009G225500--Sobic006G281900
Octagon: transcription factors


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