Gene annotation
Transcriptome id Sobic.006G281900.6,Sobic.006G281900.3,Sobic.006G281900.1,Sobic.006G281900.2,Sobic.006G281900.4,Sobic.006G281900.5,Sobic.006G281900.8,Sobic.006G281900.7
Synonym Sb06g034210, NAC082, anac082, VNI1
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
no apical meristem protein, putative, expressed
UniProt C5YB64 , A0A1Z5RGM0 , A0A1Z5RFV8
Pfam PF02365
Panther DB PTHR31989 PTHR31989:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G09330 : NAC domain containing protein 82
RAP-DB (Rice) LOC_Os05g35170.1,LOC_Os05g35170.2 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a010577
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G168000 expressed protein -
2 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
3 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
4 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
5 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
6 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
7 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
9 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -
10 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
11 Sobic.009G077300 protein kinase, putative, expressed -
12 Sobic.005G153000 agenet domain containing protein, expressed -
13 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
14 Sobic.009G127800 BZIP protein, putative, expressed -
15 Sobic.008G118100 kelch repeat protein, putative, expressed -
16 Sobic.005G163400 dnaJ domain containing protein, expressed -
17 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
20 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -


Gene co-expression network
sample Sobic006G281900 Sobic006G281900 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic001G199500 Sobic001G199500 Sobic006G281900--Sobic001G199500 Sobic001G425700 Sobic001G425700 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic002G168000--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic002G168000--Sobic005G153000 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic006G016700 Sobic006G016700 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic002G021200--Sobic007G187700 Sobic001G377700 Sobic001G377700 Sobic002G021200--Sobic001G377700 Sobic002G021200--Sobic002G168000 Sobic002G021200--Sobic006G281900 Sobic001G054700 Sobic001G054700 Sobic002G021200--Sobic001G054700 Sobic003G292700 Sobic003G292700 Sobic002G021200--Sobic003G292700 Sobic003G055600 Sobic003G055600 Sobic002G021200--Sobic003G055600 Sobic005G157300 Sobic005G157300 Sobic002G021200--Sobic005G157300 Sobic002G021200--Sobic009G077300 Sobic009G188900--Sobic002G168000 Sobic010G250400 Sobic010G250400 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic009G188900--Sobic001G199500 Sobic009G188900--Sobic006G275500 Sobic009G188900--Sobic001G425700 Sobic009G188900--Sobic001G290500 Sobic009G188900--Sobic005G153000 Sobic009G188900--Sobic007G187700 Sobic001G290500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic001G290500--Sobic006G094100 Sobic001G290500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic001G290500--Sobic003G283600 Sobic001G290500--Sobic006G275500 Sobic001G290500--Sobic001G054700 Sobic001G296100 Sobic001G296100 Sobic001G290500--Sobic001G296100 Sobic001G290500--Sobic009G188900 Sobic009G000600 Sobic009G000600 Sobic001G290500--Sobic009G000600 Sobic005G088900 Sobic005G088900 Sobic001G199500--Sobic005G088900 Sobic003G102700 Sobic003G102700 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic003G259300 Sobic003G259300 Sobic001G425700--Sobic003G259300 Sobic003G226700 Sobic003G226700 Sobic001G425700--Sobic003G226700 Sobic002G006100 Sobic002G006100 Sobic001G425700--Sobic002G006100 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic001G425700--Sobic006G281900 Sobic009G127800 Sobic009G127800 Sobic001G425700--Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic009G225500--Sobic003G259300 Sobic006G142500 Sobic006G142500 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic009G225500--Sobic006G281900 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic003G024000--Sobic001G425700 Sobic003G024000--Sobic001G199500 Sobic003G024000--Sobic006G281900 Sobic003G024000--Sobic003G226700 Sobic003G024000--Sobic001G054700 Sobic003G420300 Sobic003G420300 Sobic003G024000--Sobic003G420300 Sobic003G024000--Sobic006G084300 Sobic008G083500 Sobic008G083500 Sobic003G024000--Sobic008G083500 Sobic003G024000--Sobic003G292700
Octagon: transcription factors


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