Gene annotation
Transcriptome id Sobic.007G050800.1
Synonym Sb07g004120
Functional annotation abhydrolase domain-containing protein FAM108C1, putative, expressed
UniProt C5YHD9
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF45
NCBI CDD KOG1552; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32190 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os08g06420.1 : abhydrolase domain-containing protein FAM108C1, putative, expressed
MaizeGDB (Corn) Zm00025a022477 , Zm00025a055109
Brachypodium KQK01153 , KQJ95294 , KQJ95293 , KQJ95292 , KQJ91669
Barley HORVU7Hr1G070080.6 , HORVU7Hr1G070080.7 , HORVU7Hr1G070080.4 , HORVU7Hr1G070080.5 , HORVU7Hr1G070080.2 , HORVU7Hr1G070080.3 , HORVU7Hr1G070080.1 , HORVU7Hr1G070080.8 , HORVU7Hr1G070080.9 , HORVU6Hr1G034870.2 , HORVU6Hr1G034870.1 , HORVU6Hr1G034870.4 , HORVU6Hr1G034870.5 , HORVU7Hr1G070080.10 , HORVU7Hr1G070080.11
Wheat TraesCS6A02G360000 , TraesCS6A02G360000 , TraesCS7A02G298400 , TraesCS6D02G343000 , TraesCS7B02G188600 , TraesCS7D02G294200
Populus PNT44676


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
2 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
3 Sobic.008G118100 kelch repeat protein, putative, expressed -
4 Sobic.006G226000 expressed protein -
5 Sobic.002G168000 expressed protein -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
9 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.004G282601 - -
12 Sobic.010G037901 - -
13 Sobic.006G221300 expressed protein -
14 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.009G127800 BZIP protein, putative, expressed -
16 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -
18 Sobic.005G157300 protein binding protein, putative, expressed -
19 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.002G187600 expressed protein -


Gene co-expression network
sample Sobic007G050800 Sobic007G050800 Sobic009G002200 Sobic009G002200 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic008G118100 Sobic008G118100 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic002G168000 Sobic002G168000 Sobic007G050800--Sobic002G168000 Sobic005G153000 Sobic005G153000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G187700 Sobic007G187700 Sobic007G050800--Sobic007G187700 Sobic009G012600 Sobic009G012600 Sobic007G050800--Sobic009G012600 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic003G147500 Sobic003G147500 Sobic006G016700--Sobic003G147500 Sobic006G275500 Sobic006G275500 Sobic006G016700--Sobic006G275500 Sobic002G256900 Sobic002G256900 Sobic006G016700--Sobic002G256900 Sobic006G016700--Sobic006G226000 Sobic006G016700--Sobic007G050800 Sobic006G016700--Sobic002G168000 Sobic006G016700--Sobic007G187700 Sobic008G052300 Sobic008G052300 Sobic006G016700--Sobic008G052300 Sobic006G016700--Sobic005G153000 Sobic008G118100--Sobic007G050800 Sobic002G187600 Sobic002G187600 Sobic008G118100--Sobic002G187600 Sobic004G286200 Sobic004G286200 Sobic008G118100--Sobic004G286200 Sobic006G281900 Sobic006G281900 Sobic008G118100--Sobic006G281900 Sobic009G225500 Sobic009G225500 Sobic008G118100--Sobic009G225500 Sobic002G095300 Sobic002G095300 Sobic008G118100--Sobic002G095300 Sobic008G118100--Sobic009G002200 Sobic008G090400 Sobic008G090400 Sobic008G118100--Sobic008G090400 Sobic005G157300 Sobic005G157300 Sobic008G118100--Sobic005G157300 Sobic009G031800 Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic003G086800 Sobic003G086800 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic002G168000--Sobic006G275500 Sobic009G188900 Sobic009G188900 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic001G493100 Sobic001G493100 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G172000 Sobic006G172000 Sobic006G135800--Sobic006G172000 Sobic006G135800--Sobic009G002200 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic006G135800--Sobic007G160400 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic009G012600--Sobic007G050800 Sobic005G045700 Sobic005G045700 Sobic009G012600--Sobic005G045700 Sobic009G012600--Sobic006G226000 Sobic009G012600--Sobic007G192200 Sobic009G012600--Sobic009G002200 Sobic009G012600--Sobic005G036200 Sobic009G012600--Sobic010G037901 Sobic006G262501 Sobic006G262501 Sobic009G012600--Sobic006G262501 Sobic008G191850 Sobic008G191850 Sobic009G012600--Sobic008G191850
Octagon: transcription factors


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