Gene annotation
Transcriptome id Sobic.004G282601.1
Synonym -
Functional annotation -
UniProt A0A1Z5RQB0
Pfam PF08880
Panther DB PTHR31602
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0005524ATP binding GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT2G36400 : growth-regulating factor 3
RAP-DB (Rice) LOC_Os02g45570.1 : growth regulating factor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022322 , Zm00025a021509 , Zm00025a033037 , Zm00025a032315 , Zm00025a032451 , Zm00025a058032
Brachypodium KQK01641 , PNT76253 , KQK00767 , KQJ84140
Barley HORVU2Hr1G094460.3 , HORVU2Hr1G094460.2 , HORVU2Hr1G094460.1 , HORVU6Hr1G068370.6 , HORVU6Hr1G068370.1 , HORVU6Hr1G068370.2 , HORVU6Hr1G065740.2 , HORVU6Hr1G065740.3 , HORVU6Hr1G065740.1 , HORVU6Hr1G065740.4 , HORVU6Hr1G065740.5 , HORVU2Hr1G094470.4 , HORVU2Hr1G094470.5 , HORVU2Hr1G094470.1 , HORVU2Hr1G094470.2 , HORVU2Hr1G094470.3
Wheat TraesCS6D02G238900 , TraesCS2A02G398300 , TraesCS2A02G398300 , TraesCS6B02G267500 , TraesCS6D02G245300 , TraesCS2B02G416300 , TraesCS2D02G395900 , TraesCS6A02G257600 , TraesCS6B02G296900 , TraesCS2B02G416300 , TraesCS6A02G269600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G153000 agenet domain containing protein, expressed -
2 Sobic.001G104500 growth-regulating factor, putative, expressed -
3 Sobic.010G037901 - -
4 Sobic.009G077300 protein kinase, putative, expressed -
5 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
6 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
7 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
8 Sobic.006G221300 expressed protein -
9 Sobic.005G196600 expressed protein -
10 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G168000 expressed protein -
12 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
13 Sobic.004G317000 growth regulating factor protein, putative, expressed -
14 Sobic.004G052200 expressed protein -
15 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
16 Sobic.006G226000 expressed protein -
17 Sobic.009G188600 lysM domain containing protein, putative, expressed -
18 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
19 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
20 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP


Gene co-expression network
sample Sobic004G282601 Sobic004G282601 Sobic005G153000 Sobic005G153000 Sobic004G282601--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic004G282601--Sobic001G104500 Sobic010G037901 Sobic010G037901 Sobic004G282601--Sobic010G037901 Sobic009G077300 Sobic009G077300 Sobic004G282601--Sobic009G077300 Sobic009G002200 Sobic009G002200 Sobic004G282601--Sobic009G002200 Sobic007G187700 Sobic007G187700 Sobic004G282601--Sobic007G187700 Sobic003G290400 Sobic003G290400 Sobic004G282601--Sobic003G290400 Sobic006G221300 Sobic006G221300 Sobic004G282601--Sobic006G221300 Sobic005G196600 Sobic005G196600 Sobic004G282601--Sobic005G196600 Sobic005G153000--Sobic009G077300 Sobic002G168000 Sobic002G168000 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G153000--Sobic005G196600 Sobic001G104500--Sobic004G282601 Sobic006G275500 Sobic006G275500 Sobic001G104500--Sobic006G275500 Sobic001G104500--Sobic007G187700 Sobic004G317000 Sobic004G317000 Sobic001G104500--Sobic004G317000 Sobic002G256900 Sobic002G256900 Sobic001G104500--Sobic002G256900 Sobic001G104500--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic001G104500--Sobic002G055800 Sobic006G016700 Sobic006G016700 Sobic001G104500--Sobic006G016700 Sobic001G104500--Sobic010G037901 Sobic010G037901--Sobic005G196600 Sobic006G226000 Sobic006G226000 Sobic010G037901--Sobic006G226000 Sobic003G086800 Sobic003G086800 Sobic010G037901--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic010G037901--Sobic009G031800 Sobic009G188600 Sobic009G188600 Sobic010G037901--Sobic009G188600 Sobic010G037901--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic010G037901--Sobic006G135800 Sobic007G160400 Sobic007G160400 Sobic010G037901--Sobic007G160400 Sobic010G037901--Sobic004G282601 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic001G054700 Sobic001G054700 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic009G077300--Sobic002G168000 Sobic002G050700 Sobic002G050700 Sobic009G077300--Sobic002G050700 Sobic009G077300--Sobic004G282601 Sobic009G143200 Sobic009G143200 Sobic009G077300--Sobic009G143200 Sobic009G077300--Sobic007G187700 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic009G002200--Sobic004G282601 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic009G002200--Sobic010G037901 Sobic007G187700--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic007G187700--Sobic002G021200 Sobic007G187700--Sobic005G153000 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic007G187700--Sobic006G275500 Sobic007G187700--Sobic004G317000 Sobic007G187700--Sobic004G282601 Sobic007G187700--Sobic009G077300 Sobic003G290400--Sobic005G153000 Sobic003G290400--Sobic009G002200 Sobic003G290400--Sobic004G282601 Sobic003G290400--Sobic009G077300 Sobic003G290400--Sobic006G221300 Sobic002G027600 Sobic002G027600 Sobic003G290400--Sobic002G027600 Sobic003G290400--Sobic006G135800 Sobic007G162400 Sobic007G162400 Sobic003G290400--Sobic007G162400 Sobic003G259300 Sobic003G259300 Sobic003G290400--Sobic003G259300 Sobic009G127800 Sobic009G127800 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic005G196600--Sobic010G037901 Sobic005G196600--Sobic005G153000 Sobic005G196600--Sobic006G226000 Sobic005G196600--Sobic004G282601 Sobic005G196600--Sobic003G086800 Sobic005G196600--Sobic009G031800 Sobic001G136400 Sobic001G136400 Sobic005G196600--Sobic001G136400 Sobic005G196600--Sobic002G055800 Sobic005G196600--Sobic006G135800
Octagon: transcription factors


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