Gene annotation
Transcriptome id Sobic.010G037901.1
Synonym -
Functional annotation -
UniProt A0A194YH56
Pfam PF00646 PF03478
Panther DB PTHR33110 PTHR33110:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22180 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os06g05580.1 : OsFBDUF30 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G196600 expressed protein -
2 Sobic.006G226000 expressed protein -
3 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
4 Sobic.009G031800 - -
5 Sobic.009G188600 lysM domain containing protein, putative, expressed -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
9 Sobic.004G282601 - -
10 Sobic.009G014800 - -
11 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
12 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.003G001800 expressed protein -
14 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
15 Sobic.004G123200 MYB family transcription factor, putative, expressed -
16 Sobic.009G188500 expressed protein -
17 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
18 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
19 Sobic.001G203350 - -
20 Sobic.001G104500 growth-regulating factor, putative, expressed -


Gene co-expression network
sample Sobic010G037901 Sobic010G037901 Sobic005G196600 Sobic005G196600 Sobic010G037901--Sobic005G196600 Sobic006G226000 Sobic006G226000 Sobic010G037901--Sobic006G226000 Sobic003G086800 Sobic003G086800 Sobic010G037901--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic010G037901--Sobic009G031800 Sobic009G188600 Sobic009G188600 Sobic010G037901--Sobic009G188600 Sobic005G153000 Sobic005G153000 Sobic010G037901--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic010G037901--Sobic006G135800 Sobic007G160400 Sobic007G160400 Sobic010G037901--Sobic007G160400 Sobic004G282601 Sobic004G282601 Sobic010G037901--Sobic004G282601 Sobic005G196600--Sobic010G037901 Sobic005G196600--Sobic005G153000 Sobic005G196600--Sobic006G226000 Sobic005G196600--Sobic004G282601 Sobic005G196600--Sobic003G086800 Sobic005G196600--Sobic009G031800 Sobic001G136400 Sobic001G136400 Sobic005G196600--Sobic001G136400 Sobic002G055800 Sobic002G055800 Sobic005G196600--Sobic002G055800 Sobic005G196600--Sobic006G135800 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic006G226000--Sobic001G136400 Sobic003G086800--Sobic010G037901 Sobic003G086800--Sobic007G160400 Sobic003G086800--Sobic006G226000 Sobic003G086800--Sobic002G256900 Sobic004G142400 Sobic004G142400 Sobic003G086800--Sobic004G142400 Sobic009G014800 Sobic009G014800 Sobic003G086800--Sobic009G014800 Sobic003G086800--Sobic004G123200 Sobic006G083900 Sobic006G083900 Sobic003G086800--Sobic006G083900 Sobic001G203350 Sobic001G203350 Sobic003G086800--Sobic001G203350 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G012500 Sobic009G012500 Sobic009G031800--Sobic009G012500 Sobic005G126701 Sobic005G126701 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200 Sobic009G188600--Sobic009G014800 Sobic009G188600--Sobic001G203350 Sobic009G188600--Sobic001G136400 Sobic009G188600--Sobic010G037901 Sobic003G001800 Sobic003G001800 Sobic009G188600--Sobic003G001800 Sobic010G053400 Sobic010G053400 Sobic009G188600--Sobic010G053400 Sobic009G188600--Sobic003G086800 Sobic009G188600--Sobic009G012500 Sobic009G188600--Sobic006G083900 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic002G168000 Sobic002G168000 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic007G187700 Sobic007G187700 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G153000--Sobic005G196600 Sobic001G493100 Sobic001G493100 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G172000 Sobic006G172000 Sobic006G135800--Sobic006G172000 Sobic009G002200 Sobic009G002200 Sobic006G135800--Sobic009G002200 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic006G135800--Sobic007G160400 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic007G160400--Sobic005G126701 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic007G160400--Sobic003G086800 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic004G282601--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic004G282601--Sobic001G104500 Sobic004G282601--Sobic010G037901 Sobic004G282601--Sobic009G077300 Sobic004G282601--Sobic009G002200 Sobic004G282601--Sobic007G187700 Sobic004G282601--Sobic003G290400 Sobic004G282601--Sobic006G221300 Sobic004G282601--Sobic005G196600
Octagon: transcription factors


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