Gene annotation
Transcriptome id Sobic.007G160400.1
Synonym HB22, Sb07g023360, MEE68, ATHB22
Functional annotation ZF-HD homeobox protein, putative, expressed
UniProt C5YMP0
Pfam PF04770
Panther DB PTHR31948 PTHR31948:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24660 : homeobox protein 22
RAP-DB (Rice) LOC_Os08g37400.1 : ZF-HD homeobox protein, putative, expressed
MaizeGDB (Corn) Zm00025a014112 , Zm00025a032466 , Zm00025a021731 , Zm00025a029545 , Zm00025a025639 , Zm00025a016936 , Zm00025a047321 , Zm00025a005471 , Zm00025a007898
Brachypodium KQJ88784 , KQJ98449 , KQJ98684 , KQJ90576 , KQJ91876 , KQK00949
Barley HORVU5Hr1G065740.3 , HORVU6Hr1G069090.2 , HORVU6Hr1G069090.1 , HORVU5Hr1G065740.1 , HORVU5Hr1G065740.2 , HORVU5Hr1G069730.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
2 Sobic.006G226000 expressed protein -
3 Sobic.005G126701 - -
4 Sobic.006G083900 PHD-finger domain containing protein, expressed -
5 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
6 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
7 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
8 Sobic.009G031800 - -
9 Sobic.010G110100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"A transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659933)@transcription factor, putative, expressed K14431: transcription factor TGA
10 Sobic.001G534200 - -
11 Sobic.006G234433 - -
12 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
13 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
15 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
16 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
17 Sobic.004G091600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
18 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
19 Sobic.007G025600 amino acid transporter, putative, expressed -
20 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic007G160400 Sobic007G160400 Sobic004G142400 Sobic004G142400 Sobic007G160400--Sobic004G142400 Sobic006G226000 Sobic006G226000 Sobic007G160400--Sobic006G226000 Sobic005G126701 Sobic005G126701 Sobic007G160400--Sobic005G126701 Sobic006G083900 Sobic006G083900 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic003G086800 Sobic003G086800 Sobic007G160400--Sobic003G086800 Sobic009G012500 Sobic009G012500 Sobic007G160400--Sobic009G012500 Sobic009G031800 Sobic009G031800 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic004G142400--Sobic007G160400 Sobic004G142400--Sobic006G083900 Sobic004G142400--Sobic005G126701 Sobic003G434300 Sobic003G434300 Sobic004G142400--Sobic003G434300 Sobic008G018100 Sobic008G018100 Sobic004G142400--Sobic008G018100 Sobic004G142400--Sobic010G110100 Sobic006G234433 Sobic006G234433 Sobic004G142400--Sobic006G234433 Sobic004G142400--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic004G142400--Sobic004G091600 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic001G254800 Sobic001G254800 Sobic005G126701--Sobic001G254800 Sobic005G126701--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic005G126701--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic005G126701--Sobic001G534200 Sobic005G126701--Sobic006G234433 Sobic009G103800 Sobic009G103800 Sobic005G126701--Sobic009G103800 Sobic001G166900 Sobic001G166900 Sobic005G126701--Sobic001G166900 Sobic004G349550 Sobic004G349550 Sobic005G126701--Sobic004G349550 Sobic006G167700 Sobic006G167700 Sobic005G126701--Sobic006G167700 Sobic006G083900--Sobic006G234433 Sobic008G149300 Sobic008G149300 Sobic006G083900--Sobic008G149300 Sobic006G083900--Sobic004G349550 Sobic010G053400 Sobic010G053400 Sobic006G083900--Sobic010G053400 Sobic001G122600 Sobic001G122600 Sobic006G083900--Sobic001G122600 Sobic007G008500--Sobic001G166900 Sobic006G248000 Sobic006G248000 Sobic007G008500--Sobic006G248000 Sobic007G008500--Sobic004G349550 Sobic002G046000 Sobic002G046000 Sobic007G008500--Sobic002G046000 Sobic010G198900 Sobic010G198900 Sobic007G008500--Sobic010G198900 Sobic007G008500--Sobic006G167700 Sobic007G008500--Sobic009G103800 Sobic002G184700 Sobic002G184700 Sobic007G008500--Sobic002G184700 Sobic007G008500--Sobic007G025600 Sobic003G086800--Sobic010G037901 Sobic003G086800--Sobic007G160400 Sobic003G086800--Sobic006G226000 Sobic003G086800--Sobic002G256900 Sobic003G086800--Sobic004G142400 Sobic009G014800 Sobic009G014800 Sobic003G086800--Sobic009G014800 Sobic003G086800--Sobic004G123200 Sobic003G086800--Sobic006G083900 Sobic001G203350 Sobic001G203350 Sobic003G086800--Sobic001G203350 Sobic006G217800 Sobic006G217800 Sobic009G012500--Sobic006G217800 Sobic009G012500--Sobic006G083900 Sobic009G012500--Sobic007G008500 Sobic001G393101 Sobic001G393101 Sobic009G012500--Sobic001G393101 Sobic009G012500--Sobic008G149300 Sobic009G012500--Sobic001G166900 Sobic003G443400 Sobic003G443400 Sobic009G012500--Sobic003G443400 Sobic009G012500--Sobic001G534200 Sobic009G012500--Sobic007G025600 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G031800--Sobic009G012500 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic009G031800--Sobic006G083900 Sobic009G031800--Sobic007G025600 Sobic009G031800--Sobic001G534200 Sobic010G110100--Sobic004G349550 Sobic010G110100--Sobic007G008500 Sobic010G110100--Sobic002G046000 Sobic010G110100--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic010G110100--Sobic001G344300 Sobic010G110100--Sobic002G184700 Sobic010G110100--Sobic008G149300 Sobic010G110100--Sobic006G167700 Sobic010G110100--Sobic001G166900
Octagon: transcription factors


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