Gene annotation
Transcriptome id Sobic.005G126701.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIA6
Pfam PF00155
Panther DB PTHR13693 PTHR13693:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G23670 : long chain base2
RAP-DB (Rice) LOC_Os11g31640.1 : serine palmitoyltransferase 2, putative, expressed
MaizeGDB (Corn) Zm00025a029791 , Zm00025a029793 , Zm00025a015659 , Zm00025a014897 , Zm00025a056607 , Zm00025a042671
Brachypodium KQJ88450
Barley HORVU3Hr1G096620.6 , HORVU3Hr1G096620.7 , HORVU3Hr1G096620.4 , HORVU3Hr1G096620.5 , HORVU3Hr1G096620.2 , HORVU3Hr1G096620.3 , HORVU3Hr1G096620.1 , HORVU3Hr1G096620.8 , HORVU3Hr1G096620.9 , HORVU3Hr1G096620.10 , HORVU3Hr1G096620.11
Wheat TraesCS3B02G477100 , TraesCS3B02G477100 , TraesCS3D02G435900 , TraesCS3A02G443500 , TraesCS3A02G443500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G254800 cytochrome P450, putative, expressed -
2 Sobic.006G083900 PHD-finger domain containing protein, expressed -
3 Sobic.007G025600 amino acid transporter, putative, expressed -
4 Sobic.001G534200 - -
5 Sobic.006G234433 - -
6 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
8 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.006G167700 oleosin, putative, expressed -
10 Sobic.001G344300 - -
11 Sobic.002G184700 expressed protein -
12 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
13 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
14 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
15 Sobic.008G018100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
16 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
18 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic005G126701 Sobic005G126701 Sobic001G254800 Sobic001G254800 Sobic005G126701--Sobic001G254800 Sobic006G083900 Sobic006G083900 Sobic005G126701--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic005G126701--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic005G126701--Sobic001G534200 Sobic006G234433 Sobic006G234433 Sobic005G126701--Sobic006G234433 Sobic009G103800 Sobic009G103800 Sobic005G126701--Sobic009G103800 Sobic001G166900 Sobic001G166900 Sobic005G126701--Sobic001G166900 Sobic004G349550 Sobic004G349550 Sobic005G126701--Sobic004G349550 Sobic006G167700 Sobic006G167700 Sobic005G126701--Sobic006G167700 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic001G254800--Sobic002G184700 Sobic001G344300 Sobic001G344300 Sobic001G254800--Sobic001G344300 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic006G083900--Sobic006G234433 Sobic008G149300 Sobic008G149300 Sobic006G083900--Sobic008G149300 Sobic006G083900--Sobic004G349550 Sobic010G053400 Sobic010G053400 Sobic006G083900--Sobic010G053400 Sobic001G122600 Sobic001G122600 Sobic006G083900--Sobic001G122600 Sobic007G025600--Sobic001G254800 Sobic007G025600--Sobic009G103800 Sobic007G025600--Sobic006G167700 Sobic007G025600--Sobic004G349550 Sobic007G025600--Sobic001G344300 Sobic007G025600--Sobic008G149300 Sobic007G025600--Sobic002G184700 Sobic007G025600--Sobic001G166900 Sobic007G025600--Sobic001G534200 Sobic001G534200--Sobic006G167700 Sobic001G534200--Sobic002G184700 Sobic001G534200--Sobic009G103800 Sobic001G534200--Sobic001G166900 Sobic001G534200--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic001G534200--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G534200--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic001G534200--Sobic002G211300 Sobic001G534200--Sobic010G198900 Sobic006G234433--Sobic001G122600 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic002G046000 Sobic002G046000 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic009G103800--Sobic001G534200 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900 Sobic004G349550--Sobic001G344300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic005G184700 Sobic005G184700 Sobic004G349550--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G349550--Sobic005G184800 Sobic001G165600 Sobic001G165600 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic004G349550--Sobic001G122600 Sobic006G167700--Sobic002G184700 Sobic006G167700--Sobic009G103800 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic006G167700--Sobic004G349550
Octagon: transcription factors


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