Gene annotation
Transcriptome id Sobic.008G018100.4,Sobic.008G018100.3,Sobic.008G018100.2,Sobic.008G018100.1
Synonym Sb08g001570, SUVH1
Functional annotation histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
UniProt A0A1Z5R4E4 , A0A1B6PAX3 , A0A1Z5R5J6 , A0A1Z5R5C8
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF369
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G04940 : SU(VAR)3-9 homolog 1
RAP-DB (Rice) LOC_Os11g03700.1 : histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT70537 , KQK04419 , PNT70538 , KQJ92446
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G083900 PHD-finger domain containing protein, expressed -
2 Sobic.006G234433 - -
3 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
4 Sobic.007G025600 amino acid transporter, putative, expressed -
5 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.005G126701 - -
7 Sobic.001G122600 expressed protein -
8 Sobic.001G122600 expressed protein -
9 Sobic.001G122600 expressed protein -
10 Sobic.001G122600 expressed protein -
11 Sobic.001G122600 expressed protein -
12 Sobic.001G122600 expressed protein -
13 Sobic.001G122600 expressed protein -
14 Sobic.001G122600 expressed protein -
15 Sobic.001G122600 expressed protein -
16 Sobic.001G122600 expressed protein -
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic008G018100 Sobic008G018100 Sobic006G083900 Sobic006G083900 Sobic008G018100--Sobic006G083900 Sobic006G234433 Sobic006G234433 Sobic008G018100--Sobic006G234433 Sobic008G149300 Sobic008G149300 Sobic008G018100--Sobic008G149300 Sobic007G025600 Sobic007G025600 Sobic008G018100--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic008G018100--Sobic004G349550 Sobic005G126701 Sobic005G126701 Sobic008G018100--Sobic005G126701 Sobic001G122600 Sobic001G122600 Sobic008G018100--Sobic001G122600 Sobic006G083900--Sobic006G234433 Sobic006G083900--Sobic008G149300 Sobic006G083900--Sobic004G349550 Sobic010G053400 Sobic010G053400 Sobic006G083900--Sobic010G053400 Sobic006G083900--Sobic001G122600 Sobic006G234433--Sobic001G122600 Sobic008G149300--Sobic001G122600 Sobic001G254800 Sobic001G254800 Sobic007G025600--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic007G025600--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic007G025600--Sobic006G167700 Sobic007G025600--Sobic004G349550 Sobic001G344300 Sobic001G344300 Sobic007G025600--Sobic001G344300 Sobic007G025600--Sobic008G149300 Sobic002G184700 Sobic002G184700 Sobic007G025600--Sobic002G184700 Sobic001G166900 Sobic001G166900 Sobic007G025600--Sobic001G166900 Sobic001G534200 Sobic001G534200 Sobic007G025600--Sobic001G534200 Sobic004G349550--Sobic001G344300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic005G184700 Sobic005G184700 Sobic004G349550--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G349550--Sobic005G184800 Sobic001G165600 Sobic001G165600 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic004G349550--Sobic001G122600 Sobic005G126701--Sobic001G254800 Sobic005G126701--Sobic006G083900 Sobic005G126701--Sobic007G025600 Sobic005G126701--Sobic001G534200 Sobic005G126701--Sobic006G234433 Sobic005G126701--Sobic009G103800 Sobic005G126701--Sobic001G166900 Sobic005G126701--Sobic004G349550 Sobic005G126701--Sobic006G167700 Sobic001G122600--Sobic001G122600
Octagon: transcription factors


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