Gene annotation
Transcriptome id Sobic.005G021000.1
Synonym WRI1, WRI, ASML1, Sb05g001790, ATWRI1
Functional annotation AP2 domain containing protein, expressed
UniProt C5Y3Y9
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF21
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT3G54320 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os12g03290.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013139 , Zm00025a025030 , Zm00025a033375
Brachypodium KQJ92474
Barley HORVU4Hr1G076200.5 , HORVU4Hr1G076200.4 , HORVU4Hr1G076200.7 , HORVU4Hr1G076200.6 , HORVU4Hr1G076200.1 , HORVU4Hr1G076200.3 , HORVU4Hr1G076200.2
Wheat TraesCS4B02G292900 , TraesCS4D02G291300
Populus -


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cDNA sequences
Sobic.005G021000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G254800 cytochrome P450, putative, expressed -
2 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
4 Sobic.007G025600 amino acid transporter, putative, expressed -
5 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
6 Sobic.001G534200 - -
7 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.006G167700 oleosin, putative, expressed -
9 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
10 Sobic.002G184700 expressed protein -
11 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
13 Sobic.001G344300 - -
14 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
15 Sobic.006G234433 - -
16 Sobic.001G122600 expressed protein -
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic005G021000 Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic005G021000--Sobic001G254800 Sobic006G217800 Sobic006G217800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic007G025600 Sobic007G025600 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic001G534200 Sobic001G534200 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic001G254800--Sobic002G184700 Sobic001G344300 Sobic001G344300 Sobic001G254800--Sobic001G344300 Sobic004G349550 Sobic004G349550 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic006G217800--Sobic003G443400 Sobic001G393101 Sobic001G393101 Sobic006G217800--Sobic001G393101 Sobic006G217800--Sobic001G166900 Sobic006G217800--Sobic006G167700 Sobic006G217800--Sobic002G184700 Sobic006G217800--Sobic009G103800 Sobic006G217800--Sobic008G149300 Sobic006G217800--Sobic001G344300 Sobic001G165600 Sobic001G165600 Sobic006G217800--Sobic001G165600 Sobic003G443400--Sobic006G217800 Sobic003G443400--Sobic001G393101 Sobic003G443400--Sobic004G349550 Sobic003G443400--Sobic008G149300 Sobic003G443400--Sobic009G103800 Sobic003G443400--Sobic006G167700 Sobic003G443400--Sobic001G166900 Sobic003G443400--Sobic001G344300 Sobic005G184700 Sobic005G184700 Sobic003G443400--Sobic005G184700 Sobic007G025600--Sobic001G254800 Sobic007G025600--Sobic009G103800 Sobic007G025600--Sobic006G167700 Sobic007G025600--Sobic004G349550 Sobic007G025600--Sobic001G344300 Sobic007G025600--Sobic008G149300 Sobic007G025600--Sobic002G184700 Sobic007G025600--Sobic001G166900 Sobic007G025600--Sobic001G534200 Sobic001G122600 Sobic001G122600 Sobic008G149300--Sobic001G122600 Sobic001G534200--Sobic006G167700 Sobic001G534200--Sobic002G184700 Sobic001G534200--Sobic009G103800 Sobic001G534200--Sobic001G166900 Sobic001G534200--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic001G534200--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G534200--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic001G534200--Sobic002G211300 Sobic001G534200--Sobic010G198900 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic002G046000 Sobic002G046000 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic009G103800--Sobic001G534200 Sobic006G167700--Sobic002G184700 Sobic006G167700--Sobic009G103800 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic006G167700--Sobic004G349550 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900
Octagon: transcription factors


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