Gene annotation
Transcriptome id Sobic.010G198900.1
Synonym Sb10g024760
Functional annotation phytosulfokines 1 precursor, putative, expressed
UniProt A0A194YLE7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g42680.1 : phytosulfokines 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051468
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
2 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
3 Sobic.006G167700 oleosin, putative, expressed -
4 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
5 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
6 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
7 Sobic.002G184700 expressed protein -
8 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
9 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
11 Sobic.001G344300 - -
12 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
13 Sobic.001G498900 expressed protein -
14 Sobic.001G534200 - -
15 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
16 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
17 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
18 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
19 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
20 Sobic.007G025600 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic010G198900 Sobic010G198900 Sobic006G248000 Sobic006G248000 Sobic010G198900--Sobic006G248000 Sobic003G372600 Sobic003G372600 Sobic010G198900--Sobic003G372600 Sobic006G167700 Sobic006G167700 Sobic010G198900--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic010G198900--Sobic001G166900 Sobic002G211300 Sobic002G211300 Sobic010G198900--Sobic002G211300 Sobic002G046000 Sobic002G046000 Sobic010G198900--Sobic002G046000 Sobic002G184700 Sobic002G184700 Sobic010G198900--Sobic002G184700 Sobic010G125000 Sobic010G125000 Sobic010G198900--Sobic010G125000 Sobic009G103800 Sobic009G103800 Sobic010G198900--Sobic009G103800 Sobic006G248000--Sobic002G211300 Sobic006G248000--Sobic010G198900 Sobic006G248000--Sobic010G125000 Sobic006G248000--Sobic003G372600 Sobic006G248000--Sobic006G167700 Sobic006G248000--Sobic001G166900 Sobic006G248000--Sobic002G046000 Sobic006G248000--Sobic002G184700 Sobic001G498900 Sobic001G498900 Sobic006G248000--Sobic001G498900 Sobic001G208500 Sobic001G208500 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic004G164800 Sobic004G164800 Sobic003G372600--Sobic004G164800 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic009G037100 Sobic009G037100 Sobic003G372600--Sobic009G037100 Sobic006G167700--Sobic002G184700 Sobic006G167700--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic001G165600 Sobic001G165600 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic004G349550 Sobic004G349550 Sobic006G167700--Sobic004G349550 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic002G211300--Sobic001G165600 Sobic002G197700 Sobic002G197700 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic002G211300--Sobic008G159000 Sobic002G046000--Sobic002G184700 Sobic002G046000--Sobic006G167700 Sobic002G046000--Sobic003G372600 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic002G184700--Sobic009G103800 Sobic002G184700--Sobic006G167700 Sobic002G184700--Sobic001G344300 Sobic002G184700--Sobic002G046000 Sobic002G184700--Sobic003G372600 Sobic002G184700--Sobic001G166900 Sobic002G184700--Sobic002G211300 Sobic002G184700--Sobic001G208500 Sobic002G184700--Sobic004G349550 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic007G025600 Sobic007G025600 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic001G534200 Sobic001G534200 Sobic009G103800--Sobic001G534200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.