Gene annotation
Transcriptome id Sobic.006G248000.1
Synonym FPS1, Sb06g031320
Functional annotation polyprenyl synthetase, putative, expressed
UniProt A0A1B6PNS2
Pfam PF00348
Panther DB PTHR11525 PTHR11525:SF4
NCBI CDD KOG0711; Polyprenyl synthetase
KEGG Orthology K00787; farnesyl diphosphate synthase
Gene Ontology GO:0008299; isoprenoid biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G47770 : farnesyl diphosphate synthase 1
RAP-DB (Rice) LOC_Os04g56210.1 : polyprenyl synthetase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G248000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
2 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
3 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
4 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.006G167700 oleosin, putative, expressed -
6 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
7 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
8 Sobic.002G184700 expressed protein -
9 Sobic.001G498900 expressed protein -
10 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
11 Sobic.001G344300 - -
12 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
14 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
15 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
16 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
17 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
18 Sobic.001G534200 - -
19 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
20 Sobic.008G159000 - -


Gene co-expression network
sample Sobic006G248000 Sobic006G248000 Sobic002G211300 Sobic002G211300 Sobic006G248000--Sobic002G211300 Sobic010G198900 Sobic010G198900 Sobic006G248000--Sobic010G198900 Sobic010G125000 Sobic010G125000 Sobic006G248000--Sobic010G125000 Sobic003G372600 Sobic003G372600 Sobic006G248000--Sobic003G372600 Sobic006G167700 Sobic006G167700 Sobic006G248000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic006G248000--Sobic001G166900 Sobic002G046000 Sobic002G046000 Sobic006G248000--Sobic002G046000 Sobic002G184700 Sobic002G184700 Sobic006G248000--Sobic002G184700 Sobic001G498900 Sobic001G498900 Sobic006G248000--Sobic001G498900 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic001G208500 Sobic001G208500 Sobic002G211300--Sobic001G208500 Sobic001G165600 Sobic001G165600 Sobic002G211300--Sobic001G165600 Sobic002G197700 Sobic002G197700 Sobic002G211300--Sobic002G197700 Sobic004G164800 Sobic004G164800 Sobic002G211300--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic002G211300--Sobic008G159000 Sobic010G198900--Sobic006G248000 Sobic010G198900--Sobic003G372600 Sobic010G198900--Sobic006G167700 Sobic010G198900--Sobic001G166900 Sobic010G198900--Sobic002G211300 Sobic010G198900--Sobic002G046000 Sobic010G198900--Sobic002G184700 Sobic010G198900--Sobic010G125000 Sobic009G103800 Sobic009G103800 Sobic010G198900--Sobic009G103800 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic009G037100 Sobic009G037100 Sobic003G372600--Sobic009G037100 Sobic006G167700--Sobic002G184700 Sobic006G167700--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic004G349550 Sobic004G349550 Sobic006G167700--Sobic004G349550 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900 Sobic002G046000--Sobic002G184700 Sobic002G046000--Sobic006G167700 Sobic002G046000--Sobic003G372600 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic002G184700--Sobic009G103800 Sobic002G184700--Sobic006G167700 Sobic002G184700--Sobic001G344300 Sobic002G184700--Sobic002G046000 Sobic002G184700--Sobic003G372600 Sobic002G184700--Sobic001G166900 Sobic002G184700--Sobic002G211300 Sobic002G184700--Sobic001G208500 Sobic002G184700--Sobic004G349550 Sobic001G498900--Sobic006G248000 Sobic005G165700 Sobic005G165700 Sobic001G498900--Sobic005G165700 Sobic001G498900--Sobic010G198900 Sobic001G498900--Sobic002G211300 Sobic001G498900--Sobic009G037100 Sobic001G498900--Sobic010G125000 Sobic001G498900--Sobic003G372600 Sobic001G498900--Sobic002G046000 Sobic007G008500 Sobic007G008500 Sobic001G498900--Sobic007G008500
Octagon: transcription factors


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