Gene annotation
Transcriptome id Sobic.009G037100.1
Synonym Sb09g003150
Functional annotation oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed
UniProt A0A1Z5R0W2
Pfam PF00106
Panther DB PTHR24322 PTHR24322:SF566
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G54870 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os05g04870.1 : oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011140 , Zm00025a015130
Brachypodium KQJ85653 , KQK07632
Barley HORVU5Hr1G070420.2 , HORVU5Hr1G070420.1 , HORVU1Hr1G018140.3 , HORVU1Hr1G018140.2 , HORVU1Hr1G018140.1 , HORVU1Hr1G018140.5 , HORVU1Hr1G018140.4 , HORVU5Hr1G001570.1 , HORVU5Hr1G001570.2 , HORVU5Hr1G001570.3
Wheat TraesCS1B02G101100 , TraesCS1D02G084900 , TraesCS1A02G083800
Populus -


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cDNA sequences
Sobic.009G037100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
2 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
3 Sobic.008G159000 - -
4 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
5 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
6 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
7 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
8 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
9 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
10 Sobic.002G401400 glyoxalase family protein, putative, expressed -
11 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
12 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
13 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.006G248100 lipase, putative, expressed -
15 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
16 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
17 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
18 Sobic.001G498900 expressed protein -
19 Sobic.001G380800 cupin domain containing protein, expressed -
20 Sobic.002G184700 expressed protein -


Gene co-expression network
sample Sobic009G037100 Sobic009G037100 Sobic004G164800 Sobic004G164800 Sobic009G037100--Sobic004G164800 Sobic003G372600 Sobic003G372600 Sobic009G037100--Sobic003G372600 Sobic008G159000 Sobic008G159000 Sobic009G037100--Sobic008G159000 Sobic001G208500 Sobic001G208500 Sobic009G037100--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic009G037100--Sobic002G211300 Sobic002G393100 Sobic002G393100 Sobic009G037100--Sobic002G393100 Sobic010G125000 Sobic010G125000 Sobic009G037100--Sobic010G125000 Sobic005G165700 Sobic005G165700 Sobic009G037100--Sobic005G165700 Sobic002G197700 Sobic002G197700 Sobic009G037100--Sobic002G197700 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic004G164800--Sobic010G125000 Sobic006G248100 Sobic006G248100 Sobic004G164800--Sobic006G248100 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic002G184700 Sobic002G184700 Sobic003G372600--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic006G167700 Sobic006G167700 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic008G159000--Sobic002G184700 Sobic001G208500--Sobic003G372600 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic001G208500--Sobic006G248100 Sobic001G208500--Sobic002G197700 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic001G165600 Sobic001G165600 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G393100--Sobic002G197700 Sobic002G393100--Sobic003G372600 Sobic002G393100--Sobic009G037100 Sobic002G393100--Sobic008G159000 Sobic002G393100--Sobic006G248100 Sobic002G393100--Sobic002G211300 Sobic001G380800 Sobic001G380800 Sobic002G393100--Sobic001G380800 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic001G166900 Sobic001G166900 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic001G498900 Sobic001G498900 Sobic005G165700--Sobic001G498900 Sobic005G165700--Sobic009G037100 Sobic001G058800 Sobic001G058800 Sobic005G165700--Sobic001G058800 Sobic005G165700--Sobic002G046000 Sobic005G165700--Sobic004G164800 Sobic005G165700--Sobic006G248000 Sobic005G165700--Sobic003G372600 Sobic003G144500 Sobic003G144500 Sobic005G165700--Sobic003G144500 Sobic010G198900 Sobic010G198900 Sobic005G165700--Sobic010G198900 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100
Octagon: transcription factors


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