Gene annotation
Transcriptome id Sobic.002G211300.2,Sobic.002G211300.1
Synonym Sb02g025480, ALAAT2
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt A0A1B6QCN3
Pfam PF00155
Panther DB PTHR11751 PTHR11751:SF393
NCBI CDD -
KEGG Orthology K00814; GPT, alanine transaminase
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G72330 : alanine aminotransferase 2
RAP-DB (Rice) LOC_Os09g26380.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047116
Brachypodium -
Barley HORVU5Hr1G062990.1
Wheat TraesCS5A02G059300 , TraesCS5A02G216200 , TraesCS5B02G066600
Populus -


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cDNA sequences
Sobic.002G211300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
2 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
3 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
4 Sobic.006G167700 oleosin, putative, expressed -
5 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
7 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
8 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
9 Sobic.008G159000 - -
10 Sobic.002G184700 expressed protein -
11 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
12 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
13 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
15 Sobic.001G344300 - -
16 Sobic.004G000900 expressed protein -
17 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
18 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
19 Sobic.001G534200 - -
20 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family


Gene co-expression network
sample Sobic002G211300 Sobic002G211300 Sobic010G125000 Sobic010G125000 Sobic002G211300--Sobic010G125000 Sobic003G372600 Sobic003G372600 Sobic002G211300--Sobic003G372600 Sobic006G248000 Sobic006G248000 Sobic002G211300--Sobic006G248000 Sobic006G167700 Sobic006G167700 Sobic002G211300--Sobic006G167700 Sobic001G208500 Sobic001G208500 Sobic002G211300--Sobic001G208500 Sobic001G165600 Sobic001G165600 Sobic002G211300--Sobic001G165600 Sobic002G197700 Sobic002G197700 Sobic002G211300--Sobic002G197700 Sobic004G164800 Sobic004G164800 Sobic002G211300--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic002G211300--Sobic008G159000 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic001G166900 Sobic001G166900 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic002G184700 Sobic002G184700 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic009G037100 Sobic009G037100 Sobic003G372600--Sobic009G037100 Sobic006G248000--Sobic002G211300 Sobic010G198900 Sobic010G198900 Sobic006G248000--Sobic010G198900 Sobic006G248000--Sobic010G125000 Sobic006G248000--Sobic003G372600 Sobic006G248000--Sobic006G167700 Sobic006G248000--Sobic001G166900 Sobic006G248000--Sobic002G046000 Sobic006G248000--Sobic002G184700 Sobic001G498900 Sobic001G498900 Sobic006G248000--Sobic001G498900 Sobic006G167700--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic006G167700--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic004G349550 Sobic004G349550 Sobic006G167700--Sobic004G349550 Sobic001G208500--Sobic003G372600 Sobic002G393100 Sobic002G393100 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic006G248100 Sobic006G248100 Sobic001G208500--Sobic006G248100 Sobic001G208500--Sobic002G197700 Sobic001G165600--Sobic010G125000 Sobic001G165600--Sobic006G167700 Sobic001G122600 Sobic001G122600 Sobic001G165600--Sobic001G122600 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic004G164800--Sobic010G125000 Sobic004G164800--Sobic006G248100 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic008G159000--Sobic002G184700
Octagon: transcription factors


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