Gene annotation
Transcriptome id Sobic.004G164800.2,Sobic.004G164800.1
Synonym Sb04g021630
Functional annotation poly synthetase 3, putative, expressed
UniProt A0A194YQ61 , A0A194YR75
Pfam PF00533 PF05406 PF02877 PF08063 PF00644
Panther DB PTHR10459 PTHR10459:SF54
NCBI CDD KOG1037; NAD+ ADP-ribosyltransferase Parp, required for poly-ADP ribosylation of nuclear proteins
KEGG Orthology K10798; poly [ADP-ribose] polymerase 2/3/4
Gene Ontology GO:0006471; protein ADP-ribosylation GO:0003950NAD+ ADP-ribosyltransferase activity GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G22470 : NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases
RAP-DB (Rice) LOC_Os02g32860.1 : poly synthetase 3, putative, expressed
MaizeGDB (Corn) Zm00025a020537
Brachypodium KQJ99714
Barley HORVU1Hr1G077820.17 , HORVU1Hr1G077820.16 , HORVU1Hr1G077820.15 , HORVU1Hr1G077820.14 , HORVU1Hr1G077820.13 , HORVU1Hr1G077820.12 , HORVU1Hr1G077820.11 , HORVU1Hr1G077820.10 , HORVU1Hr1G077820.19 , HORVU1Hr1G077820.18 , HORVU1Hr1G077820.34 , HORVU1Hr1G077820.31 , HORVU1Hr1G077820.30 , HORVU1Hr1G077820.32 , HORVU1Hr1G077820.35 , HORVU1Hr1G077820.36 , HORVU1Hr1G077820.9 , HORVU1Hr1G077820.8 , HORVU1Hr1G077820.7 , HORVU1Hr1G077820.6 , HORVU1Hr1G077820.5 , HORVU1Hr1G077820.4 , HORVU1Hr1G077820.3 , HORVU1Hr1G077820.2 , HORVU1Hr1G077820.1 , HORVU1Hr1G077820.28 , HORVU1Hr1G077820.29 , HORVU1Hr1G077820.26 , HORVU1Hr1G077820.27 , HORVU1Hr1G077820.24 , HORVU1Hr1G077820.25 , HORVU1Hr1G077820.22 , HORVU1Hr1G077820.23 , HORVU1Hr1G077820.20 , HORVU1Hr1G077820.21 , HORVU5Hr1G036380.1
Wheat TraesCS1B02G341700 , TraesCS1D02G330500 , TraesCS1A02G328000
Populus -


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cDNA sequences
Sobic.004G164800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
2 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
3 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
4 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
6 Sobic.008G159000 - -
7 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
8 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
9 Sobic.006G248100 lipase, putative, expressed -
10 Sobic.002G401400 glyoxalase family protein, putative, expressed -
11 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
12 Sobic.001G380800 cupin domain containing protein, expressed -
13 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.002G184700 expressed protein -
15 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
16 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
17 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
18 Sobic.006G167700 oleosin, putative, expressed -
19 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
20 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G164800 Sobic004G164800 Sobic009G037100 Sobic009G037100 Sobic004G164800--Sobic009G037100 Sobic002G393100 Sobic002G393100 Sobic004G164800--Sobic002G393100 Sobic001G208500 Sobic001G208500 Sobic004G164800--Sobic001G208500 Sobic003G372600 Sobic003G372600 Sobic004G164800--Sobic003G372600 Sobic002G211300 Sobic002G211300 Sobic004G164800--Sobic002G211300 Sobic008G159000 Sobic008G159000 Sobic004G164800--Sobic008G159000 Sobic002G197700 Sobic002G197700 Sobic004G164800--Sobic002G197700 Sobic010G125000 Sobic010G125000 Sobic004G164800--Sobic010G125000 Sobic006G248100 Sobic006G248100 Sobic004G164800--Sobic006G248100 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic009G037100--Sobic008G159000 Sobic009G037100--Sobic001G208500 Sobic009G037100--Sobic002G211300 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic005G165700 Sobic005G165700 Sobic009G037100--Sobic005G165700 Sobic009G037100--Sobic002G197700 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G393100--Sobic002G197700 Sobic002G393100--Sobic003G372600 Sobic002G393100--Sobic009G037100 Sobic002G393100--Sobic008G159000 Sobic002G393100--Sobic006G248100 Sobic002G393100--Sobic002G211300 Sobic001G380800 Sobic001G380800 Sobic002G393100--Sobic001G380800 Sobic001G208500--Sobic003G372600 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic002G184700 Sobic002G184700 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic001G208500--Sobic006G248100 Sobic001G208500--Sobic002G197700 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic006G167700 Sobic006G167700 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic001G165600 Sobic001G165600 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic008G159000--Sobic002G184700 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic001G166900 Sobic001G166900 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic006G248100--Sobic001G208500 Sobic006G248100--Sobic002G393100 Sobic003G051400 Sobic003G051400 Sobic006G248100--Sobic003G051400 Sobic006G248100--Sobic003G372600 Sobic006G248100--Sobic004G164800 Sobic006G248100--Sobic008G159000 Sobic006G248100--Sobic009G037100 Sobic002G401400 Sobic002G401400 Sobic006G248100--Sobic002G401400 Sobic006G248100--Sobic002G184700
Octagon: transcription factors


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