Gene annotation
Transcriptome id Sobic.002G393100.1
Synonym Sb02g040840, HSD1, ATHSD1
Functional annotation dehydrogenase/reductase, putative, expressed
UniProt C5X3D8
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF449
NCBI CDD KOG1205; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50600 : hydroxysteroid dehydrogenase 1
RAP-DB (Rice) LOC_Os12g27830.1 : dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a048938
Brachypodium KQJ86780 , PNT62743 , PNT62742
Barley -
Wheat TraesCS5B02G559400 , TraesCS4A02G319700 , TraesCS4A02G319700 , TraesCS5D02G565600
Populus -


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cDNA sequences
Sobic.002G393100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
2 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
3 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
4 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
6 Sobic.008G159000 - -
7 Sobic.006G248100 lipase, putative, expressed -
8 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
9 Sobic.001G380800 cupin domain containing protein, expressed -
10 Sobic.002G401400 glyoxalase family protein, putative, expressed -
11 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
12 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
13 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
14 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G184700 expressed protein -
16 Sobic.001G534200 - -
17 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
18 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
19 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
20 Sobic.006G167700 oleosin, putative, expressed -


Gene co-expression network
sample Sobic002G393100 Sobic002G393100 Sobic001G208500 Sobic001G208500 Sobic002G393100--Sobic001G208500 Sobic004G164800 Sobic004G164800 Sobic002G393100--Sobic004G164800 Sobic002G197700 Sobic002G197700 Sobic002G393100--Sobic002G197700 Sobic003G372600 Sobic003G372600 Sobic002G393100--Sobic003G372600 Sobic009G037100 Sobic009G037100 Sobic002G393100--Sobic009G037100 Sobic008G159000 Sobic008G159000 Sobic002G393100--Sobic008G159000 Sobic006G248100 Sobic006G248100 Sobic002G393100--Sobic006G248100 Sobic002G211300 Sobic002G211300 Sobic002G393100--Sobic002G211300 Sobic001G380800 Sobic001G380800 Sobic002G393100--Sobic001G380800 Sobic001G208500--Sobic003G372600 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic002G184700 Sobic002G184700 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic001G208500--Sobic006G248100 Sobic001G208500--Sobic002G197700 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic010G125000 Sobic010G125000 Sobic004G164800--Sobic010G125000 Sobic004G164800--Sobic006G248100 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic001G165600 Sobic001G165600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic006G167700 Sobic006G167700 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic009G037100--Sobic008G159000 Sobic009G037100--Sobic001G208500 Sobic009G037100--Sobic002G211300 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic005G165700 Sobic005G165700 Sobic009G037100--Sobic005G165700 Sobic009G037100--Sobic002G197700 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic008G159000--Sobic002G184700 Sobic006G248100--Sobic001G208500 Sobic006G248100--Sobic002G393100 Sobic003G051400 Sobic003G051400 Sobic006G248100--Sobic003G051400 Sobic006G248100--Sobic003G372600 Sobic006G248100--Sobic004G164800 Sobic006G248100--Sobic008G159000 Sobic006G248100--Sobic009G037100 Sobic002G401400 Sobic002G401400 Sobic006G248100--Sobic002G401400 Sobic006G248100--Sobic002G184700 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000 Sobic004G301800 Sobic004G301800 Sobic001G380800--Sobic004G301800 Sobic010G142900 Sobic010G142900 Sobic001G380800--Sobic010G142900 Sobic003G295600 Sobic003G295600 Sobic001G380800--Sobic003G295600 Sobic001G418500 Sobic001G418500 Sobic001G380800--Sobic001G418500 Sobic003G437400 Sobic003G437400 Sobic001G380800--Sobic003G437400 Sobic001G380800--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic001G380800--Sobic001G126900 Sobic001G380800--Sobic002G393100 Sobic003G098800 Sobic003G098800 Sobic001G380800--Sobic003G098800
Octagon: transcription factors


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