Gene annotation
| Transcriptome id | Sobic.002G401400.1 |
|---|---|
| Synonym | Sb02g041630 |
| Functional annotation | glyoxalase family protein, putative, expressed |
| UniProt | C5X457 |
| Pfam | PF12681 |
| Panther DB | PTHR10374 PTHR10374:SF10 |
| NCBI CDD | KOG2944; Glyoxalase |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT2G28420 : Lactoylglutathione lyase / glyoxalase I family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os07g46360.1 : glyoxalase family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a049010 , Zm00025a036850 |
| Brachypodium | KQK14880 , KQJ83816 |
| Barley | HORVU1Hr1G025530.3 , HORVU1Hr1G025530.2 , HORVU1Hr1G025530.1 , HORVU1Hr1G025530.4 , HORVU1Hr1G025580.3 , HORVU1Hr1G025580.2 , HORVU1Hr1G025580.1 |
| Wheat | TraesCS2A02G133100 , TraesCS1D02G117100 , TraesCS2D02G135100 , TraesCS1D02G117200 , TraesCS1D02G117300 , TraesCS1B02G136100 , TraesCS1B02G135700 , TraesCS1A02G115800 , TraesCS1A02G115700 , TraesCS1A02G116100 , TraesCS2B02G156600 |
| Populus | - |
JBrowse
| Sobic.002G401400 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G418500 | glyoxalase family protein, putative, expressed | - |
| 2 | Sobic.003G144500 | Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed | - |
| 3 | Sobic.001G126900 | oleosin, putative, expressed | - |
| 4 | Sobic.010G142900 | oleosin, putative, expressed | - |
| 5 | Sobic.001G380800 | cupin domain containing protein, expressed | - |
| 6 | Sobic.009G037100 | oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed | - |
| 7 | Sobic.004G164800 | poly synthetase 3, putative, expressed | K10798: poly [ADP-ribose] polymerase 2/3/4 |
| 8 | Sobic.003G395000 | cysteine proteinase EP-B 1 precursor, putative, expressed | - |
| 9 | Sobic.002G393100 | dehydrogenase/reductase, putative, expressed | - |
| 10 | Sobic.004G301800 | vacuolar-processing enzyme precursor, putative, expressed | K01369: legumain |
| 11 | Sobic.008G159000 | - | - |
| 12 | Sobic.010G269950 | - | - |
| 13 | Sobic.006G248100 | lipase, putative, expressed | - |
| 14 | Sobic.003G051400 | cytochrome c oxidase polypeptide Vc, putative, expressed | - |
| 15 | Sobic.001G208500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed | K09873: aquaporin TIP |
| 16 | Sobic.003G295600 | DUF1264 domain containing protein, putative, expressed | - |
| 17 | Sobic.001G544400 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed | - |
| 18 | Sobic.001G058800 | cysteine proteinase EP-B 1 precursor, putative, expressed | - |
| 19 | Sobic.003G372600 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 20 | Sobic.007G218500 | (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed | K18883: tricin synthase |
Gene co-expression network
Octagon: transcription factors
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