Gene annotation
| Transcriptome id | Sobic.007G218500.1 |
|---|---|
| Synonym | Sb07g028490, CCoAOMT1, SbCCoAOMT-like genes;caffeoyl-coenzyme A O-methyltransferases-like protein, SbCCoAOMT-5 |
| Functional annotation | (50.9% identity with SbCCoAOMT/68.5% similarity) (PubMedID : 27457122) Functions are not investigated (PubMedID : 29721721) caffeoyl-CoA O-methyltransferase, putative, expressed |
| UniProt | C5YJ98 |
| Pfam | PF13578 |
| Panther DB | PTHR10509 PTHR10509:SF21 |
| NCBI CDD | KOG1663; O-methyltransferase |
| KEGG Orthology | K18883; tricin synthase |
| Gene Ontology | GO:0008171; O-methyltransferase activity |
Orthologs (automatic annotation)
| TAIR | AT4G34050 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g38910.1 : caffeoyl-CoA O-methyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a033741 |
| Brachypodium | KQJ98832 , KQJ98833 , KQJ98831 |
| Barley | HORVU7Hr1G049070.3 , HORVU7Hr1G049070.2 , HORVU7Hr1G049070.1 , HORVU7Hr1G012680.3 , HORVU5Hr1G072070.3 , HORVU5Hr1G072070.2 , HORVU5Hr1G072070.1 , HORVU5Hr1G072070.5 , HORVU5Hr1G072070.4 , HORVU7Hr1G012680.1 , HORVU7Hr1G012680.2 |
| Wheat | TraesCS7B02G136000 , TraesCS7D02G239400 , TraesCS7A02G240400 , TraesCS7A02G068600 , TraesCS7A02G068600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G104500 | small hydrophilic plant seed protein, putative, expressed | - |
| 2 | Sobic.008G159000 | - | - |
| 3 | Sobic.002G046000 | zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed | - |
| 4 | Sobic.001G344300 | - | - |
| 5 | Sobic.002G184700 | expressed protein | - |
| 6 | Sobic.009G037100 | oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed | - |
| 7 | Sobic.003G372600 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 8 | Sobic.002G401400 | glyoxalase family protein, putative, expressed | - |
| 9 | Sobic.005G165700 | AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed | - |
| 10 | Sobic.003G144500 | Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed | - |
| 11 | Sobic.004G091600 | ethylene receptor, putative, expressed | K14509: ETR, ethylene receptor |
| 12 | Sobic.001G208500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed | K09873: aquaporin TIP |
| 13 | Sobic.004G164800 | poly synthetase 3, putative, expressed | K10798: poly [ADP-ribose] polymerase 2/3/4 |
| 14 | Sobic.002G211300 | aminotransferase, classes I and II, domain containing protein, expressed | K00814: GPT, alanine transaminase |
| 15 | Sobic.009G103800 | "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 16 | Sobic.006G248100 | lipase, putative, expressed | - |
| 17 | Sobic.006G167700 | oleosin, putative, expressed | - |
| 18 | Sobic.003G395000 | cysteine proteinase EP-B 1 precursor, putative, expressed | - |
| 19 | Sobic.010G125000 | steroid nuclear receptor, ligand-binding, putative, expressed | - |
| 20 | Sobic.002G197700 | -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
