Gene annotation
Transcriptome id Sobic.004G091600.1
Synonym Sb04g007500, ETR2
Functional annotation ethylene receptor, putative, expressed
UniProt C5XY13
Pfam PF00072 PF01590
Panther DB PTHR24423 PTHR24423:SF550
NCBI CDD KOG0519; Sensory transduction histidine kinase
KEGG Orthology K14509; ETR, ethylene receptor
Gene Ontology GO:0000160; phosphorelay signal transduction system GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G23150 : Signal transduction histidine kinase, hybrid-type, ethylene sensor
RAP-DB (Rice) LOC_Os07g15540.1 : ethylene receptor, putative, expressed
MaizeGDB (Corn) Zm00025a034571
Brachypodium KQK01419 , PNT69498
Barley HORVU6Hr1G080170.1
Wheat TraesCS6B02G360200 , TraesCS6B02G314600 , TraesCS6D02G266200 , TraesCS6A02G329400 , TraesCS6A02G285800 , TraesCS6A02G285800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218500 (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
2 Sobic.005G167650 - -
3 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
4 Sobic.009G104500 small hydrophilic plant seed protein, putative, expressed -
5 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
7 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.001G344300 - -
9 Sobic.010G007800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed -
10 Sobic.002G184700 expressed protein -
11 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
12 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
13 Sobic.006G167700 oleosin, putative, expressed -
14 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
15 Sobic.005G184700 - -
16 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
18 Sobic.007G025600 amino acid transporter, putative, expressed -
19 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
20 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase


Gene co-expression network
sample Sobic004G091600 Sobic004G091600 Sobic007G218500 Sobic007G218500 Sobic004G091600--Sobic007G218500 Sobic005G167650 Sobic005G167650 Sobic004G091600--Sobic005G167650 Sobic003G061500 Sobic003G061500 Sobic004G091600--Sobic003G061500 Sobic009G104500 Sobic009G104500 Sobic004G091600--Sobic009G104500 Sobic002G046000 Sobic002G046000 Sobic004G091600--Sobic002G046000 Sobic004G349550 Sobic004G349550 Sobic004G091600--Sobic004G349550 Sobic009G103800 Sobic009G103800 Sobic004G091600--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic004G091600--Sobic001G344300 Sobic010G007800 Sobic010G007800 Sobic004G091600--Sobic010G007800 Sobic007G218500--Sobic009G104500 Sobic008G159000 Sobic008G159000 Sobic007G218500--Sobic008G159000 Sobic007G218500--Sobic002G046000 Sobic007G218500--Sobic001G344300 Sobic002G184700 Sobic002G184700 Sobic007G218500--Sobic002G184700 Sobic009G037100 Sobic009G037100 Sobic007G218500--Sobic009G037100 Sobic003G372600 Sobic003G372600 Sobic007G218500--Sobic003G372600 Sobic002G401400 Sobic002G401400 Sobic007G218500--Sobic002G401400 Sobic005G165700 Sobic005G165700 Sobic007G218500--Sobic005G165700 Sobic005G167650--Sobic004G091600 Sobic001G497700 Sobic001G497700 Sobic005G167650--Sobic001G497700 Sobic005G167650--Sobic010G007800 Sobic005G167650--Sobic009G104500 Sobic009G104600 Sobic009G104600 Sobic005G167650--Sobic009G104600 Sobic005G167650--Sobic003G061500 Sobic005G167650--Sobic007G218500 Sobic010G256100 Sobic010G256100 Sobic005G167650--Sobic010G256100 Sobic001G144900 Sobic001G144900 Sobic005G167650--Sobic001G144900 Sobic003G061500--Sobic004G349550 Sobic003G061500--Sobic004G091600 Sobic005G184700 Sobic005G184700 Sobic003G061500--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic003G061500--Sobic005G184800 Sobic003G061500--Sobic002G046000 Sobic003G061500--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic003G061500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic003G061500--Sobic001G166900 Sobic001G165600 Sobic001G165600 Sobic003G061500--Sobic001G165600 Sobic009G104500--Sobic007G218500 Sobic009G104500--Sobic010G007800 Sobic003G144500 Sobic003G144500 Sobic009G104500--Sobic003G144500 Sobic009G104500--Sobic002G401400 Sobic009G104500--Sobic005G165700 Sobic009G104500--Sobic001G497700 Sobic001G126900 Sobic001G126900 Sobic009G104500--Sobic001G126900 Sobic009G104500--Sobic009G104600 Sobic009G104500--Sobic008G159000 Sobic002G046000--Sobic002G184700 Sobic006G167700 Sobic006G167700 Sobic002G046000--Sobic006G167700 Sobic002G046000--Sobic003G372600 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic006G248000 Sobic006G248000 Sobic002G046000--Sobic006G248000 Sobic002G211300 Sobic002G211300 Sobic002G046000--Sobic002G211300 Sobic010G198900 Sobic010G198900 Sobic002G046000--Sobic010G198900 Sobic004G349550--Sobic001G344300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic004G349550--Sobic005G184700 Sobic004G349550--Sobic005G184800 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic001G122600 Sobic001G122600 Sobic004G349550--Sobic001G122600 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic007G025600 Sobic007G025600 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic001G534200 Sobic001G534200 Sobic009G103800--Sobic001G534200 Sobic001G344300--Sobic009G103800 Sobic001G344300--Sobic002G184700 Sobic001G344300--Sobic006G167700 Sobic001G344300--Sobic004G349550 Sobic001G344300--Sobic002G046000 Sobic001G344300--Sobic001G165600 Sobic001G344300--Sobic001G166900 Sobic001G344300--Sobic003G372600 Sobic001G344300--Sobic002G211300 Sobic010G007800--Sobic009G104500 Sobic010G007800--Sobic001G497700 Sobic010G007800--Sobic009G104600 Sobic010G007800--Sobic007G218500 Sobic010G007800--Sobic004G091600 Sobic002G185100 Sobic002G185100 Sobic010G007800--Sobic002G185100 Sobic010G007800--Sobic003G144500 Sobic010G007800--Sobic005G167650 Sobic010G007800--Sobic005G165700
Octagon: transcription factors


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