Gene annotation
Transcriptome id Sobic.005G165700.1
Synonym Sb05g022640
Functional annotation AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed
UniProt C5Y598
Pfam PF14861
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g37270.1 : AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed
MaizeGDB (Corn) Zm00025a033896
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G165700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G498900 expressed protein -
2 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
3 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
4 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
5 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
6 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
7 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
8 Sobic.003G144500 Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
9 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
10 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
11 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
12 Sobic.002G401400 glyoxalase family protein, putative, expressed -
13 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
14 Sobic.008G159000 - -
15 Sobic.007G218500 (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
16 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
17 Sobic.001G126900 oleosin, putative, expressed -
18 Sobic.002G184700 expressed protein -
19 Sobic.006G248100 lipase, putative, expressed -
20 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic005G165700 Sobic005G165700 Sobic001G498900 Sobic001G498900 Sobic005G165700--Sobic001G498900 Sobic009G037100 Sobic009G037100 Sobic005G165700--Sobic009G037100 Sobic001G058800 Sobic001G058800 Sobic005G165700--Sobic001G058800 Sobic002G046000 Sobic002G046000 Sobic005G165700--Sobic002G046000 Sobic004G164800 Sobic004G164800 Sobic005G165700--Sobic004G164800 Sobic006G248000 Sobic006G248000 Sobic005G165700--Sobic006G248000 Sobic003G372600 Sobic003G372600 Sobic005G165700--Sobic003G372600 Sobic003G144500 Sobic003G144500 Sobic005G165700--Sobic003G144500 Sobic010G198900 Sobic010G198900 Sobic005G165700--Sobic010G198900 Sobic001G498900--Sobic006G248000 Sobic001G498900--Sobic005G165700 Sobic001G498900--Sobic010G198900 Sobic002G211300 Sobic002G211300 Sobic001G498900--Sobic002G211300 Sobic001G498900--Sobic009G037100 Sobic010G125000 Sobic010G125000 Sobic001G498900--Sobic010G125000 Sobic001G498900--Sobic003G372600 Sobic001G498900--Sobic002G046000 Sobic007G008500 Sobic007G008500 Sobic001G498900--Sobic007G008500 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic008G159000 Sobic008G159000 Sobic009G037100--Sobic008G159000 Sobic001G208500 Sobic001G208500 Sobic009G037100--Sobic001G208500 Sobic009G037100--Sobic002G211300 Sobic002G393100 Sobic002G393100 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic009G037100--Sobic005G165700 Sobic002G197700 Sobic002G197700 Sobic009G037100--Sobic002G197700 Sobic001G058800--Sobic005G165700 Sobic003G437400 Sobic003G437400 Sobic001G058800--Sobic003G437400 Sobic001G380800 Sobic001G380800 Sobic001G058800--Sobic001G380800 Sobic001G058800--Sobic009G037100 Sobic010G131500 Sobic010G131500 Sobic001G058800--Sobic010G131500 Sobic001G058800--Sobic004G164800 Sobic003G051400 Sobic003G051400 Sobic001G058800--Sobic003G051400 Sobic001G058800--Sobic001G208500 Sobic001G058800--Sobic003G372600 Sobic002G184700 Sobic002G184700 Sobic002G046000--Sobic002G184700 Sobic006G167700 Sobic006G167700 Sobic002G046000--Sobic006G167700 Sobic002G046000--Sobic003G372600 Sobic001G344300 Sobic001G344300 Sobic002G046000--Sobic001G344300 Sobic009G103800 Sobic009G103800 Sobic002G046000--Sobic009G103800 Sobic001G166900 Sobic001G166900 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic004G164800--Sobic010G125000 Sobic006G248100 Sobic006G248100 Sobic004G164800--Sobic006G248100 Sobic006G248000--Sobic002G211300 Sobic006G248000--Sobic010G198900 Sobic006G248000--Sobic010G125000 Sobic006G248000--Sobic003G372600 Sobic006G248000--Sobic006G167700 Sobic006G248000--Sobic001G166900 Sobic006G248000--Sobic002G046000 Sobic006G248000--Sobic002G184700 Sobic006G248000--Sobic001G498900 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic002G401400 Sobic002G401400 Sobic003G144500--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic003G144500--Sobic001G126900 Sobic001G418500 Sobic001G418500 Sobic003G144500--Sobic001G418500 Sobic010G142900 Sobic010G142900 Sobic003G144500--Sobic010G142900 Sobic003G144500--Sobic009G037100 Sobic003G144500--Sobic001G380800 Sobic010G269950 Sobic010G269950 Sobic003G144500--Sobic010G269950 Sobic003G144500--Sobic004G164800 Sobic003G395000 Sobic003G395000 Sobic003G144500--Sobic003G395000 Sobic010G198900--Sobic006G248000 Sobic010G198900--Sobic003G372600 Sobic010G198900--Sobic006G167700 Sobic010G198900--Sobic001G166900 Sobic010G198900--Sobic002G211300 Sobic010G198900--Sobic002G046000 Sobic010G198900--Sobic002G184700 Sobic010G198900--Sobic010G125000 Sobic010G198900--Sobic009G103800
Octagon: transcription factors


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