Gene annotation
Transcriptome id Sobic.001G498900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQF7
Pfam PF04842
Panther DB PTHR31860 PTHR31860:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21720 : Plant protein of unknown function (DUF639)
RAP-DB (Rice) LOC_Os03g06180.1 : expressed protein
MaizeGDB (Corn) Zm00025a053444
Brachypodium -
Barley HORVU4Hr1G072830.2 , HORVU4Hr1G072830.3 , HORVU4Hr1G072830.1 , HORVU4Hr1G072830.5
Wheat TraesCSU02G256300 , TraesCS4A02G032300 , TraesCS4A02G032300 , TraesCSU02G229500 , TraesCS4B02G273300 , TraesCS4D02G272200
Populus -


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cDNA sequences
Sobic.001G498900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
2 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
3 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
4 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
5 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
6 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
7 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
8 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
9 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
10 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
11 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
12 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
13 Sobic.006G167700 oleosin, putative, expressed -
14 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.002G184700 expressed protein -
16 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
17 Sobic.008G159000 - -
18 Sobic.001G344300 - -
19 Sobic.002G327600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
20 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -


Gene co-expression network
sample Sobic001G498900 Sobic001G498900 Sobic006G248000 Sobic006G248000 Sobic001G498900--Sobic006G248000 Sobic005G165700 Sobic005G165700 Sobic001G498900--Sobic005G165700 Sobic010G198900 Sobic010G198900 Sobic001G498900--Sobic010G198900 Sobic002G211300 Sobic002G211300 Sobic001G498900--Sobic002G211300 Sobic009G037100 Sobic009G037100 Sobic001G498900--Sobic009G037100 Sobic010G125000 Sobic010G125000 Sobic001G498900--Sobic010G125000 Sobic003G372600 Sobic003G372600 Sobic001G498900--Sobic003G372600 Sobic002G046000 Sobic002G046000 Sobic001G498900--Sobic002G046000 Sobic007G008500 Sobic007G008500 Sobic001G498900--Sobic007G008500 Sobic006G248000--Sobic002G211300 Sobic006G248000--Sobic010G198900 Sobic006G248000--Sobic010G125000 Sobic006G248000--Sobic003G372600 Sobic006G167700 Sobic006G167700 Sobic006G248000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic006G248000--Sobic001G166900 Sobic006G248000--Sobic002G046000 Sobic002G184700 Sobic002G184700 Sobic006G248000--Sobic002G184700 Sobic006G248000--Sobic001G498900 Sobic005G165700--Sobic001G498900 Sobic005G165700--Sobic009G037100 Sobic001G058800 Sobic001G058800 Sobic005G165700--Sobic001G058800 Sobic005G165700--Sobic002G046000 Sobic004G164800 Sobic004G164800 Sobic005G165700--Sobic004G164800 Sobic005G165700--Sobic006G248000 Sobic005G165700--Sobic003G372600 Sobic003G144500 Sobic003G144500 Sobic005G165700--Sobic003G144500 Sobic005G165700--Sobic010G198900 Sobic010G198900--Sobic006G248000 Sobic010G198900--Sobic003G372600 Sobic010G198900--Sobic006G167700 Sobic010G198900--Sobic001G166900 Sobic010G198900--Sobic002G211300 Sobic010G198900--Sobic002G046000 Sobic010G198900--Sobic002G184700 Sobic010G198900--Sobic010G125000 Sobic009G103800 Sobic009G103800 Sobic010G198900--Sobic009G103800 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic001G208500 Sobic001G208500 Sobic002G211300--Sobic001G208500 Sobic001G165600 Sobic001G165600 Sobic002G211300--Sobic001G165600 Sobic002G197700 Sobic002G197700 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic002G211300--Sobic008G159000 Sobic009G037100--Sobic004G164800 Sobic009G037100--Sobic003G372600 Sobic009G037100--Sobic008G159000 Sobic009G037100--Sobic001G208500 Sobic009G037100--Sobic002G211300 Sobic002G393100 Sobic002G393100 Sobic009G037100--Sobic002G393100 Sobic009G037100--Sobic010G125000 Sobic009G037100--Sobic005G165700 Sobic009G037100--Sobic002G197700 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic010G125000--Sobic006G248000 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic003G372600--Sobic002G046000 Sobic003G372600--Sobic010G125000 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic002G046000--Sobic002G184700 Sobic002G046000--Sobic006G167700 Sobic002G046000--Sobic003G372600 Sobic001G344300 Sobic001G344300 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic007G008500--Sobic001G166900 Sobic007G008500--Sobic006G248000 Sobic004G349550 Sobic004G349550 Sobic007G008500--Sobic004G349550 Sobic007G008500--Sobic002G046000 Sobic007G008500--Sobic010G198900 Sobic007G008500--Sobic006G167700 Sobic007G008500--Sobic009G103800 Sobic007G008500--Sobic002G184700 Sobic007G025600 Sobic007G025600 Sobic007G008500--Sobic007G025600
Octagon: transcription factors


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