Gene annotation
Transcriptome id Sobic.003G144500.2,Sobic.003G144500.3,Sobic.003G144500.1
Synonym Sb03g012500, ATOEP16-2, ATOEP16-S
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt A0A1B6Q369 , A0A1W0VXB4 , A0A1B6Q364
Pfam PF02466
Panther DB PTHR15371 PTHR15371:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16160 : Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
RAP-DB (Rice) LOC_Os01g19770.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) Zm00025a024295
Brachypodium KQK04083
Barley HORVU5Hr1G010330.1 , HORVU4Hr1G054110.1 , HORVU4Hr1G054110.2
Wheat TraesCS5B02G046000 , TraesCS4D02G186100 , TraesCS4D02G186100 , TraesCS5D02G050800 , TraesCS4B02G184800 , TraesCS4B02G184800
Populus -


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cDNA sequences
Sobic.003G144500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G401400 glyoxalase family protein, putative, expressed -
2 Sobic.001G126900 oleosin, putative, expressed -
3 Sobic.001G418500 glyoxalase family protein, putative, expressed -
4 Sobic.010G142900 oleosin, putative, expressed -
5 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
6 Sobic.001G380800 cupin domain containing protein, expressed -
7 Sobic.010G269950 - -
8 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
9 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
10 Sobic.005G165700 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed -
11 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
12 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
13 Sobic.006G248100 lipase, putative, expressed -
14 Sobic.001G544400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed -
15 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
16 Sobic.008G159000 - -
17 Sobic.009G104500 small hydrophilic plant seed protein, putative, expressed -
18 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
19 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
20 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic003G144500 Sobic003G144500 Sobic002G401400 Sobic002G401400 Sobic003G144500--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic003G144500--Sobic001G126900 Sobic001G418500 Sobic001G418500 Sobic003G144500--Sobic001G418500 Sobic010G142900 Sobic010G142900 Sobic003G144500--Sobic010G142900 Sobic009G037100 Sobic009G037100 Sobic003G144500--Sobic009G037100 Sobic001G380800 Sobic001G380800 Sobic003G144500--Sobic001G380800 Sobic010G269950 Sobic010G269950 Sobic003G144500--Sobic010G269950 Sobic004G164800 Sobic004G164800 Sobic003G144500--Sobic004G164800 Sobic003G395000 Sobic003G395000 Sobic003G144500--Sobic003G395000 Sobic002G401400--Sobic001G418500 Sobic002G401400--Sobic003G144500 Sobic002G401400--Sobic001G126900 Sobic002G401400--Sobic010G142900 Sobic002G401400--Sobic001G380800 Sobic002G401400--Sobic009G037100 Sobic002G401400--Sobic004G164800 Sobic002G401400--Sobic003G395000 Sobic002G393100 Sobic002G393100 Sobic002G401400--Sobic002G393100 Sobic001G126900--Sobic002G401400 Sobic001G126900--Sobic010G142900 Sobic001G126900--Sobic003G144500 Sobic001G126900--Sobic001G418500 Sobic001G126900--Sobic001G380800 Sobic001G126900--Sobic010G269950 Sobic006G143600 Sobic006G143600 Sobic001G126900--Sobic006G143600 Sobic003G295600 Sobic003G295600 Sobic001G126900--Sobic003G295600 Sobic004G301800 Sobic004G301800 Sobic001G126900--Sobic004G301800 Sobic001G418500--Sobic010G142900 Sobic001G418500--Sobic002G401400 Sobic001G418500--Sobic001G380800 Sobic001G418500--Sobic004G301800 Sobic001G418500--Sobic001G126900 Sobic001G418500--Sobic003G295600 Sobic001G418500--Sobic003G144500 Sobic001G544400 Sobic001G544400 Sobic001G418500--Sobic001G544400 Sobic003G399500 Sobic003G399500 Sobic001G418500--Sobic003G399500 Sobic010G142900--Sobic001G418500 Sobic010G142900--Sobic001G380800 Sobic010G142900--Sobic003G295600 Sobic010G142900--Sobic004G301800 Sobic010G142900--Sobic001G126900 Sobic010G142900--Sobic002G401400 Sobic010G142900--Sobic003G144500 Sobic003G283700 Sobic003G283700 Sobic010G142900--Sobic003G283700 Sobic010G142900--Sobic001G544400 Sobic009G037100--Sobic004G164800 Sobic003G372600 Sobic003G372600 Sobic009G037100--Sobic003G372600 Sobic008G159000 Sobic008G159000 Sobic009G037100--Sobic008G159000 Sobic001G208500 Sobic001G208500 Sobic009G037100--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic009G037100--Sobic002G211300 Sobic009G037100--Sobic002G393100 Sobic010G125000 Sobic010G125000 Sobic009G037100--Sobic010G125000 Sobic005G165700 Sobic005G165700 Sobic009G037100--Sobic005G165700 Sobic002G197700 Sobic002G197700 Sobic009G037100--Sobic002G197700 Sobic001G380800--Sobic004G301800 Sobic001G380800--Sobic010G142900 Sobic001G380800--Sobic003G295600 Sobic001G380800--Sobic001G418500 Sobic003G437400 Sobic003G437400 Sobic001G380800--Sobic003G437400 Sobic001G380800--Sobic002G401400 Sobic001G380800--Sobic001G126900 Sobic001G380800--Sobic002G393100 Sobic003G098800 Sobic003G098800 Sobic001G380800--Sobic003G098800 Sobic003G051400 Sobic003G051400 Sobic010G269950--Sobic003G051400 Sobic010G269950--Sobic001G126900 Sobic010G269950--Sobic002G401400 Sobic010G269950--Sobic003G144500 Sobic010G269950--Sobic010G142900 Sobic010G269950--Sobic001G380800 Sobic010G269950--Sobic001G418500 Sobic006G248100 Sobic006G248100 Sobic010G269950--Sobic006G248100 Sobic010G269950--Sobic006G143600 Sobic004G164800--Sobic009G037100 Sobic004G164800--Sobic002G393100 Sobic004G164800--Sobic001G208500 Sobic004G164800--Sobic003G372600 Sobic004G164800--Sobic002G211300 Sobic004G164800--Sobic008G159000 Sobic004G164800--Sobic002G197700 Sobic004G164800--Sobic010G125000 Sobic004G164800--Sobic006G248100 Sobic003G395000--Sobic002G401400 Sobic003G395000--Sobic008G159000 Sobic003G395000--Sobic009G037100 Sobic003G395000--Sobic003G144500 Sobic003G395000--Sobic004G164800 Sobic003G395000--Sobic002G393100 Sobic003G395000--Sobic001G208500 Sobic003G395000--Sobic001G418500 Sobic003G395000--Sobic006G248100
Octagon: transcription factors


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