Gene annotation
Transcriptome id Sobic.005G167650.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIZ4
Pfam -
Panther DB PTHR23155 PTHR23155:SF529
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46730 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os02g57310.1 : pib, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G091600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
2 Sobic.001G497700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
3 Sobic.010G007800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed -
4 Sobic.009G104500 small hydrophilic plant seed protein, putative, expressed -
5 Sobic.009G104600 small hydrophilic plant seed protein, putative, expressed -
6 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
7 Sobic.007G218500 (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
8 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G144900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@cupin domain containing protein, expressed -
10 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
12 Sobic.001G344300 - -
13 Sobic.005G184700 - -
14 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.002G185100 succinate dehydrogenase and fumarate reductase iron-sulfur protein, expressed K00235: SDHB, succinate dehydrogenase (ubiquinone) iron-sulfur subunit
16 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
17 Sobic.002G184700 expressed protein -
18 Sobic.006G095900 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
20 Sobic.005G184800 - -


Gene co-expression network
sample Sobic005G167650 Sobic005G167650 Sobic004G091600 Sobic004G091600 Sobic005G167650--Sobic004G091600 Sobic001G497700 Sobic001G497700 Sobic005G167650--Sobic001G497700 Sobic010G007800 Sobic010G007800 Sobic005G167650--Sobic010G007800 Sobic009G104500 Sobic009G104500 Sobic005G167650--Sobic009G104500 Sobic009G104600 Sobic009G104600 Sobic005G167650--Sobic009G104600 Sobic003G061500 Sobic003G061500 Sobic005G167650--Sobic003G061500 Sobic007G218500 Sobic007G218500 Sobic005G167650--Sobic007G218500 Sobic010G256100 Sobic010G256100 Sobic005G167650--Sobic010G256100 Sobic001G144900 Sobic001G144900 Sobic005G167650--Sobic001G144900 Sobic004G091600--Sobic007G218500 Sobic004G091600--Sobic005G167650 Sobic004G091600--Sobic003G061500 Sobic004G091600--Sobic009G104500 Sobic002G046000 Sobic002G046000 Sobic004G091600--Sobic002G046000 Sobic004G349550 Sobic004G349550 Sobic004G091600--Sobic004G349550 Sobic009G103800 Sobic009G103800 Sobic004G091600--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic004G091600--Sobic001G344300 Sobic004G091600--Sobic010G007800 Sobic001G497700--Sobic009G104600 Sobic001G497700--Sobic010G007800 Sobic001G497700--Sobic009G104500 Sobic002G185100 Sobic002G185100 Sobic001G497700--Sobic002G185100 Sobic001G497700--Sobic001G144900 Sobic001G497700--Sobic005G167650 Sobic001G497700--Sobic007G218500 Sobic001G497700--Sobic004G091600 Sobic003G130400 Sobic003G130400 Sobic001G497700--Sobic003G130400 Sobic010G007800--Sobic009G104500 Sobic010G007800--Sobic001G497700 Sobic010G007800--Sobic009G104600 Sobic010G007800--Sobic007G218500 Sobic010G007800--Sobic004G091600 Sobic010G007800--Sobic002G185100 Sobic003G144500 Sobic003G144500 Sobic010G007800--Sobic003G144500 Sobic010G007800--Sobic005G167650 Sobic005G165700 Sobic005G165700 Sobic010G007800--Sobic005G165700 Sobic009G104500--Sobic007G218500 Sobic009G104500--Sobic010G007800 Sobic009G104500--Sobic003G144500 Sobic002G401400 Sobic002G401400 Sobic009G104500--Sobic002G401400 Sobic009G104500--Sobic005G165700 Sobic009G104500--Sobic001G497700 Sobic001G126900 Sobic001G126900 Sobic009G104500--Sobic001G126900 Sobic009G104500--Sobic009G104600 Sobic008G159000 Sobic008G159000 Sobic009G104500--Sobic008G159000 Sobic009G104600--Sobic001G497700 Sobic009G104600--Sobic010G007800 Sobic009G104600--Sobic009G104500 Sobic009G104600--Sobic002G185100 Sobic009G104600--Sobic001G144900 Sobic009G104600--Sobic005G167650 Sobic009G104600--Sobic003G130400 Sobic009G104600--Sobic007G218500 Sobic010G269950 Sobic010G269950 Sobic009G104600--Sobic010G269950 Sobic003G061500--Sobic004G349550 Sobic003G061500--Sobic004G091600 Sobic005G184700 Sobic005G184700 Sobic003G061500--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic003G061500--Sobic005G184800 Sobic003G061500--Sobic002G046000 Sobic003G061500--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic003G061500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic003G061500--Sobic001G166900 Sobic001G165600 Sobic001G165600 Sobic003G061500--Sobic001G165600 Sobic007G218500--Sobic009G104500 Sobic007G218500--Sobic008G159000 Sobic007G218500--Sobic002G046000 Sobic007G218500--Sobic001G344300 Sobic002G184700 Sobic002G184700 Sobic007G218500--Sobic002G184700 Sobic009G037100 Sobic009G037100 Sobic007G218500--Sobic009G037100 Sobic003G372600 Sobic003G372600 Sobic007G218500--Sobic003G372600 Sobic007G218500--Sobic002G401400 Sobic007G218500--Sobic005G165700 Sobic010G256100--Sobic003G061500 Sobic010G256100--Sobic004G091600 Sobic010G256100--Sobic009G104500 Sobic010G256100--Sobic007G218500 Sobic010G256100--Sobic002G046000 Sobic010G256100--Sobic004G349550 Sobic010G256100--Sobic005G165700 Sobic007G008500 Sobic007G008500 Sobic010G256100--Sobic007G008500 Sobic003G443400 Sobic003G443400 Sobic010G256100--Sobic003G443400 Sobic001G144900--Sobic001G497700 Sobic001G144900--Sobic009G104600 Sobic001G144900--Sobic005G167650 Sobic001G144900--Sobic010G007800 Sobic001G144900--Sobic002G185100 Sobic001G144900--Sobic009G104500 Sobic002G383500 Sobic002G383500 Sobic001G144900--Sobic002G383500 Sobic001G144900--Sobic004G091600 Sobic007G004900 Sobic007G004900 Sobic001G144900--Sobic007G004900
Octagon: transcription factors


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