Gene annotation
| Transcriptome id | Sobic.003G443400.1,Sobic.003G443400.2 |
|---|---|
| Synonym | Sb03g047310 |
| Functional annotation | glycerol-3-phosphate dehydrogenase, putative, expressed |
| UniProt | C5XJD7 , A0A1W0W1K0 |
| Pfam | PF01210 PF07479 |
| Panther DB | PTHR11728 PTHR11728:SF8 |
| NCBI CDD | KOG2711; Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase |
| KEGG Orthology | K00006; glycerol-3-phosphate dehydrogenase (NAD+) |
| Gene Ontology | GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0005975carbohydrate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process |
Orthologs (automatic annotation)
| TAIR | AT5G40610 : NAD-dependent glycerol-3-phosphate dehydrogenase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g74000.1 : glycerol-3-phosphate dehydrogenase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a025834 |
| Brachypodium | KQK11740 , KQK11741 , PNT73666 , PNT73667 |
| Barley | HORVU3Hr1G114350.40 , HORVU3Hr1G114350.39 , HORVU3Hr1G114350.38 , HORVU3Hr1G114350.31 , HORVU3Hr1G114350.30 , HORVU3Hr1G114350.33 , HORVU3Hr1G114350.32 , HORVU3Hr1G114350.35 , HORVU3Hr1G114350.34 , HORVU3Hr1G114350.37 , HORVU3Hr1G114350.36 , HORVU3Hr1G114350.28 , HORVU3Hr1G114350.29 , HORVU3Hr1G114350.26 , HORVU3Hr1G114350.27 , HORVU3Hr1G114350.24 , HORVU3Hr1G114350.25 , HORVU3Hr1G114350.22 , HORVU3Hr1G114350.23 , HORVU3Hr1G114350.20 , HORVU3Hr1G114350.21 |
| Wheat | TraesCS3D02G529400 , TraesCS3D02G529400 , TraesCS3D02G529400 , TraesCS3A02G523900 , TraesCS3A02G523900 , TraesCSU02G054700 , TraesCSU02G054700 , TraesCSU02G054700 |
| Populus | - |
JBrowse
| Sobic.003G443400 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G217800 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 2 | Sobic.001G393101 | - | - |
| 3 | Sobic.004G349550 | - | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 4 | Sobic.008G149300 | B3 DNA binding domain containing protein, expressed | - |
| 5 | Sobic.009G103800 | "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 6 | Sobic.006G167700 | oleosin, putative, expressed | - |
| 7 | Sobic.001G166900 | B3 DNA binding domain containing protein, expressed | - |
| 8 | Sobic.001G344300 | - | - |
| 9 | Sobic.005G184700 | - | - |
| 10 | Sobic.005G184800 | - | - |
| 11 | Sobic.002G184700 | expressed protein | - |
| 12 | Sobic.001G165600 | THION1 - Plant thionin family protein precursor, putative, expressed | - |
| 13 | Sobic.001G122600 | expressed protein | - |
| 14 | Sobic.001G122600 | expressed protein | - |
| 15 | Sobic.001G122600 | expressed protein | - |
| 16 | Sobic.001G122600 | expressed protein | - |
| 17 | Sobic.001G122600 | expressed protein | - |
| 18 | Sobic.001G122600 | expressed protein | - |
| 19 | Sobic.001G122600 | expressed protein | - |
| 20 | Sobic.001G122600 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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