Gene annotation
Transcriptome id Sobic.003G437400.1
Synonym Sb03g046810, SPC4
Functional annotation The major cationic peroxidase in sorghum grain (SPC4) (PubMedID : 16650004)
peroxidase precursor, putative, expressed
UniProt P84516
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF66
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G71695 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g73220.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048553 , Zm00025a036435 , Zm00025a052957 , Zm00025a040226 , Zm00025a011430 , Zm00025a025891 , Zm00025a025893 , Zm00025a024245 , Zm00025a044121
Brachypodium KQK03746 , KQK03846 , PNT64332 , KQJ82616 , KQK03745 , KQJ85452 , KQK21232 , KQK16275 , KQJ97885 , KQK14648 , KQJ95997 , KQK07348 , KQK23930 , PNT66525 , PNT66526 , KQK14656
Barley HORVU1Hr1G020690.4 , HORVU1Hr1G020690.5 , HORVU1Hr1G020690.1 , HORVU1Hr1G020690.2 , HORVU1Hr1G020690.3 , HORVU4Hr1G084910.1 , HORVU4Hr1G084910.2 , HORVU4Hr1G084910.3 , HORVU2Hr1G064390.1 , HORVU3Hr1G112350.1 , HORVU3Hr1G112350.2 , HORVU2Hr1G064330.1 , HORVU7Hr1G013470.1 , HORVU4Hr1G064950.2 , HORVU4Hr1G064950.3 , HORVU4Hr1G064950.1 , HORVU4Hr1G064950.6 , HORVU4Hr1G064950.4 , HORVU4Hr1G064950.5 , HORVU4Hr1G064960.4 , HORVU7Hr1G093400.1 , HORVU7Hr1G093400.2 , HORVU1Hr1G023750.1 , HORVU1Hr1G023750.2 , HORVU3Hr1G111980.1 , HORVU7Hr1G098110.8 , HORVU7Hr1G098110.6 , HORVU7Hr1G098110.7 , HORVU7Hr1G098110.5 , HORVU7Hr1G098110.2 , HORVU7Hr1G098110.1 , HORVU3Hr1G112000.1 , HORVU7Hr1G098110.4 , HORVU3Hr1G112040.1 , HORVU7Hr1G098110.3 , HORVU7Hr1G083550.6 , HORVU7Hr1G083550.7 , HORVU7Hr1G083550.4 , HORVU7Hr1G083550.5 , HORVU7Hr1G083550.2 , HORVU7Hr1G083550.3 , HORVU7Hr1G077880.1
Wheat TraesCS3D02G517000 , TraesCS4D02G342500 , TraesCS1B02G115900 , TraesCS1A02G104300 , TraesCS7A02G424100 , TraesCS1D02G110600 , TraesCS7A02G339600 , TraesCS2D02G265000 , TraesCS2B02G317200 , TraesCS5A02G323200 , TraesCS5D02G330300 , TraesCS1D02G203700 , TraesCS7D02G253200 , TraesCS7D02G347300 , TraesCS7D02G417400 , TraesCS1B02G214900 , TraesCS3A02G509100 , TraesCS3D02G516900 , TraesCS7B02G325800 , TraesCS3A02G510600 , TraesCS1D02G096400 , TraesCS4B02G347600 , TraesCS4B02G347600 , TraesCS7B02G150800 , TraesCS7B02G150800 , TraesCS3B02G578000 , TraesCS5A02G516200 , TraesCS2A02G301000 , TraesCS5B02G323700 , TraesCS2B02G284800 , TraesCS2D02G299700 , TraesCS1D02G402200 , TraesCS3B02G577900 , TraesCS7A02G254700
Populus -


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cDNA sequences
Sobic.003G437400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G131500 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
2 Sobic.003G098800 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
3 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
4 Sobic.001G380800 cupin domain containing protein, expressed -
5 Sobic.004G301800 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
6 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
7 Sobic.006G248100 lipase, putative, expressed -
8 Sobic.003G295600 DUF1264 domain containing protein, putative, expressed -
9 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
10 Sobic.009G250500 expressed protein -
11 Sobic.010G142900 oleosin, putative, expressed -
12 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
13 Sobic.003G283700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1264 domain containing protein, putative, expressed -
14 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
15 Sobic.001G126900 oleosin, putative, expressed -
16 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
17 Sobic.001G544400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@oleosin, putative, expressed -
18 Sobic.002G401400 glyoxalase family protein, putative, expressed -
19 Sobic.010G269950 - -
20 Sobic.001G418500 glyoxalase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G437400 Sobic003G437400 Sobic010G131500 Sobic010G131500 Sobic003G437400--Sobic010G131500 Sobic003G098800 Sobic003G098800 Sobic003G437400--Sobic003G098800 Sobic003G051400 Sobic003G051400 Sobic003G437400--Sobic003G051400 Sobic001G380800 Sobic001G380800 Sobic003G437400--Sobic001G380800 Sobic004G301800 Sobic004G301800 Sobic003G437400--Sobic004G301800 Sobic001G058800 Sobic001G058800 Sobic003G437400--Sobic001G058800 Sobic006G248100 Sobic006G248100 Sobic003G437400--Sobic006G248100 Sobic003G295600 Sobic003G295600 Sobic003G437400--Sobic003G295600 Sobic002G393100 Sobic002G393100 Sobic003G437400--Sobic002G393100 Sobic010G131500--Sobic003G437400 Sobic010G131500--Sobic003G098800 Sobic009G250500 Sobic009G250500 Sobic010G131500--Sobic009G250500 Sobic010G131500--Sobic003G051400 Sobic010G131500--Sobic001G058800 Sobic010G131500--Sobic001G380800 Sobic003G398200 Sobic003G398200 Sobic010G131500--Sobic003G398200 Sobic010G131500--Sobic006G248100 Sobic010G131500--Sobic004G301800 Sobic003G098800--Sobic003G437400 Sobic003G098800--Sobic010G131500 Sobic003G098800--Sobic003G295600 Sobic003G098800--Sobic001G380800 Sobic003G283700 Sobic003G283700 Sobic003G098800--Sobic003G283700 Sobic003G098800--Sobic004G301800 Sobic002G391100 Sobic002G391100 Sobic003G098800--Sobic002G391100 Sobic003G098800--Sobic003G051400 Sobic010G142900 Sobic010G142900 Sobic003G098800--Sobic010G142900 Sobic003G051400--Sobic003G437400 Sobic010G269950 Sobic010G269950 Sobic003G051400--Sobic010G269950 Sobic003G051400--Sobic010G131500 Sobic003G051400--Sobic001G380800 Sobic003G051400--Sobic006G248100 Sobic003G051400--Sobic002G393100 Sobic001G208500 Sobic001G208500 Sobic003G051400--Sobic001G208500 Sobic003G051400--Sobic003G098800 Sobic003G051400--Sobic001G058800 Sobic001G380800--Sobic004G301800 Sobic001G380800--Sobic010G142900 Sobic001G380800--Sobic003G295600 Sobic001G418500 Sobic001G418500 Sobic001G380800--Sobic001G418500 Sobic001G380800--Sobic003G437400 Sobic002G401400 Sobic002G401400 Sobic001G380800--Sobic002G401400 Sobic001G126900 Sobic001G126900 Sobic001G380800--Sobic001G126900 Sobic001G380800--Sobic002G393100 Sobic001G380800--Sobic003G098800 Sobic004G301800--Sobic001G380800 Sobic004G301800--Sobic010G142900 Sobic004G301800--Sobic003G295600 Sobic004G301800--Sobic001G418500 Sobic004G281700 Sobic004G281700 Sobic004G301800--Sobic004G281700 Sobic004G301800--Sobic003G283700 Sobic004G301800--Sobic003G098800 Sobic004G301800--Sobic002G401400 Sobic004G301800--Sobic003G437400 Sobic005G165700 Sobic005G165700 Sobic001G058800--Sobic005G165700 Sobic001G058800--Sobic003G437400 Sobic001G058800--Sobic001G380800 Sobic009G037100 Sobic009G037100 Sobic001G058800--Sobic009G037100 Sobic001G058800--Sobic010G131500 Sobic004G164800 Sobic004G164800 Sobic001G058800--Sobic004G164800 Sobic001G058800--Sobic003G051400 Sobic001G058800--Sobic001G208500 Sobic003G372600 Sobic003G372600 Sobic001G058800--Sobic003G372600 Sobic006G248100--Sobic001G208500 Sobic006G248100--Sobic002G393100 Sobic006G248100--Sobic003G051400 Sobic006G248100--Sobic003G372600 Sobic006G248100--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic006G248100--Sobic008G159000 Sobic006G248100--Sobic009G037100 Sobic006G248100--Sobic002G401400 Sobic002G184700 Sobic002G184700 Sobic006G248100--Sobic002G184700 Sobic003G295600--Sobic003G283700 Sobic003G295600--Sobic010G142900 Sobic003G295600--Sobic004G301800 Sobic003G295600--Sobic001G380800 Sobic003G295600--Sobic003G098800 Sobic003G295600--Sobic001G418500 Sobic003G295600--Sobic004G281700 Sobic003G295600--Sobic001G126900 Sobic003G295600--Sobic002G391100 Sobic002G393100--Sobic001G208500 Sobic002G393100--Sobic004G164800 Sobic002G197700 Sobic002G197700 Sobic002G393100--Sobic002G197700 Sobic002G393100--Sobic003G372600 Sobic002G393100--Sobic009G037100 Sobic002G393100--Sobic008G159000 Sobic002G393100--Sobic006G248100 Sobic002G211300 Sobic002G211300 Sobic002G393100--Sobic002G211300 Sobic002G393100--Sobic001G380800
Octagon: transcription factors


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