Gene annotation
Transcriptome id Sobic.003G398200.2,Sobic.003G398200.1
Synonym SIS10, Sb03g043480, ABI3
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt A0A1B6Q7T6 , C5XFL5
Pfam PF02362
Panther DB PTHR31140 PTHR31140:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G24650 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os01g68370.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026327
Brachypodium KQK11144 , KQK11143
Barley HORVU3Hr1G092690.9 , HORVU3Hr1G092690.8 , HORVU3Hr1G092690.3 , HORVU3Hr1G092690.2 , HORVU3Hr1G092690.1 , HORVU3Hr1G092690.7 , HORVU3Hr1G092690.6 , HORVU3Hr1G092690.5 , HORVU3Hr1G092690.4
Wheat TraesCS3B02G452200 , TraesCS3A02G417300 , TraesCS3A02G417300 , TraesCS3D02G412800 , TraesCS3D02G412800 , TraesCS3B02G452200
Populus -


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cDNA sequences
Sobic.003G398200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G250500 expressed protein -
2 Sobic.010G131500 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
3 Sobic.006G248100 lipase, putative, expressed -
4 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
5 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
8 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
9 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
10 Sobic.002G184700 expressed protein -
11 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
12 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
13 Sobic.002G393100 dehydrogenase/reductase, putative, expressed -
14 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
16 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
17 Sobic.006G167700 oleosin, putative, expressed -
18 Sobic.001G534200 - -
19 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.001G498900 expressed protein -


Gene co-expression network
sample Sobic003G398200 Sobic003G398200 Sobic009G250500 Sobic009G250500 Sobic003G398200--Sobic009G250500 Sobic010G131500 Sobic010G131500 Sobic003G398200--Sobic010G131500 Sobic006G248100 Sobic006G248100 Sobic003G398200--Sobic006G248100 Sobic001G058800 Sobic001G058800 Sobic003G398200--Sobic001G058800 Sobic003G437400 Sobic003G437400 Sobic003G398200--Sobic003G437400 Sobic001G208500 Sobic001G208500 Sobic003G398200--Sobic001G208500 Sobic003G051400 Sobic003G051400 Sobic003G398200--Sobic003G051400 Sobic003G372600 Sobic003G372600 Sobic003G398200--Sobic003G372600 Sobic010G198900 Sobic010G198900 Sobic003G398200--Sobic010G198900 Sobic009G250500--Sobic010G131500 Sobic009G250500--Sobic003G398200 Sobic009G250500--Sobic003G437400 Sobic009G250500--Sobic001G058800 Sobic003G098800 Sobic003G098800 Sobic009G250500--Sobic003G098800 Sobic009G250500--Sobic003G051400 Sobic006G143600 Sobic006G143600 Sobic009G250500--Sobic006G143600 Sobic009G250500--Sobic006G248100 Sobic003G100000 Sobic003G100000 Sobic009G250500--Sobic003G100000 Sobic010G131500--Sobic003G437400 Sobic010G131500--Sobic003G098800 Sobic010G131500--Sobic009G250500 Sobic010G131500--Sobic003G051400 Sobic010G131500--Sobic001G058800 Sobic001G380800 Sobic001G380800 Sobic010G131500--Sobic001G380800 Sobic010G131500--Sobic003G398200 Sobic010G131500--Sobic006G248100 Sobic004G301800 Sobic004G301800 Sobic010G131500--Sobic004G301800 Sobic006G248100--Sobic001G208500 Sobic002G393100 Sobic002G393100 Sobic006G248100--Sobic002G393100 Sobic006G248100--Sobic003G051400 Sobic006G248100--Sobic003G372600 Sobic004G164800 Sobic004G164800 Sobic006G248100--Sobic004G164800 Sobic008G159000 Sobic008G159000 Sobic006G248100--Sobic008G159000 Sobic009G037100 Sobic009G037100 Sobic006G248100--Sobic009G037100 Sobic002G401400 Sobic002G401400 Sobic006G248100--Sobic002G401400 Sobic002G184700 Sobic002G184700 Sobic006G248100--Sobic002G184700 Sobic005G165700 Sobic005G165700 Sobic001G058800--Sobic005G165700 Sobic001G058800--Sobic003G437400 Sobic001G058800--Sobic001G380800 Sobic001G058800--Sobic009G037100 Sobic001G058800--Sobic010G131500 Sobic001G058800--Sobic004G164800 Sobic001G058800--Sobic003G051400 Sobic001G058800--Sobic001G208500 Sobic001G058800--Sobic003G372600 Sobic003G437400--Sobic010G131500 Sobic003G437400--Sobic003G098800 Sobic003G437400--Sobic003G051400 Sobic003G437400--Sobic001G380800 Sobic003G437400--Sobic004G301800 Sobic003G437400--Sobic001G058800 Sobic003G437400--Sobic006G248100 Sobic003G295600 Sobic003G295600 Sobic003G437400--Sobic003G295600 Sobic003G437400--Sobic002G393100 Sobic001G208500--Sobic003G372600 Sobic001G208500--Sobic002G393100 Sobic001G208500--Sobic004G164800 Sobic002G211300 Sobic002G211300 Sobic001G208500--Sobic002G211300 Sobic001G208500--Sobic008G159000 Sobic001G208500--Sobic002G184700 Sobic001G208500--Sobic009G037100 Sobic001G208500--Sobic006G248100 Sobic002G197700 Sobic002G197700 Sobic001G208500--Sobic002G197700 Sobic003G051400--Sobic003G437400 Sobic010G269950 Sobic010G269950 Sobic003G051400--Sobic010G269950 Sobic003G051400--Sobic010G131500 Sobic003G051400--Sobic001G380800 Sobic003G051400--Sobic006G248100 Sobic003G051400--Sobic002G393100 Sobic003G051400--Sobic001G208500 Sobic003G051400--Sobic003G098800 Sobic003G051400--Sobic001G058800 Sobic003G372600--Sobic001G208500 Sobic003G372600--Sobic002G211300 Sobic003G372600--Sobic002G184700 Sobic006G248000 Sobic006G248000 Sobic003G372600--Sobic006G248000 Sobic003G372600--Sobic004G164800 Sobic002G046000 Sobic002G046000 Sobic003G372600--Sobic002G046000 Sobic010G125000 Sobic010G125000 Sobic003G372600--Sobic010G125000 Sobic006G167700 Sobic006G167700 Sobic003G372600--Sobic006G167700 Sobic003G372600--Sobic009G037100 Sobic010G198900--Sobic006G248000 Sobic010G198900--Sobic003G372600 Sobic010G198900--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic010G198900--Sobic001G166900 Sobic010G198900--Sobic002G211300 Sobic010G198900--Sobic002G046000 Sobic010G198900--Sobic002G184700 Sobic010G198900--Sobic010G125000 Sobic009G103800 Sobic009G103800 Sobic010G198900--Sobic009G103800
Octagon: transcription factors


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