Gene annotation
Transcriptome id Sobic.010G110100.2,Sobic.010G110100.1
Synonym Sb10g009592, PAN,
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
"A transcription factor(Ortholog in rice:Huang et al., 2012)" (PubMedID : 31659933)
transcription factor, putative, expressed
UniProt A0A194YIE5 , A0A1W0VSD7
Pfam PF00170 PF14144
Panther DB PTHR22952 PTHR22952:SF209
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT1G68640 : bZIP transcription factor family protein
RAP-DB (Rice) LOC_Os06g15480.2,LOC_Os06g15480.1 : transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a042695
Brachypodium PNT76086 , PNT76085 , KQK18657
Barley HORVU7Hr1G042180.6 , HORVU7Hr1G042180.4 , HORVU7Hr1G042180.5 , HORVU7Hr1G042180.2 , HORVU7Hr1G042180.3
Wheat TraesCS7D02G209800 , TraesCS7B02G114300 , TraesCS7A02G207100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
2 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
3 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
5 Sobic.001G344300 - -
6 Sobic.002G184700 expressed protein -
7 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
8 Sobic.006G167700 oleosin, putative, expressed -
9 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
10 Sobic.007G025600 amino acid transporter, putative, expressed -
11 Sobic.006G083900 PHD-finger domain containing protein, expressed -
12 Sobic.006G234433 - -
13 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
14 Sobic.004G091600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
15 Sobic.001G534200 - -
16 Sobic.005G184700 - -
17 Sobic.010G053400 expressed protein -
18 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
19 Sobic.001G164800 B3 DNA binding domain containing protein, expressed -
20 Sobic.005G184800 - -


Gene co-expression network
sample Sobic010G110100 Sobic010G110100 Sobic004G349550 Sobic004G349550 Sobic010G110100--Sobic004G349550 Sobic007G008500 Sobic007G008500 Sobic010G110100--Sobic007G008500 Sobic002G046000 Sobic002G046000 Sobic010G110100--Sobic002G046000 Sobic009G103800 Sobic009G103800 Sobic010G110100--Sobic009G103800 Sobic001G344300 Sobic001G344300 Sobic010G110100--Sobic001G344300 Sobic002G184700 Sobic002G184700 Sobic010G110100--Sobic002G184700 Sobic008G149300 Sobic008G149300 Sobic010G110100--Sobic008G149300 Sobic006G167700 Sobic006G167700 Sobic010G110100--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic010G110100--Sobic001G166900 Sobic004G349550--Sobic001G344300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic005G184700 Sobic005G184700 Sobic004G349550--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G349550--Sobic005G184800 Sobic001G165600 Sobic001G165600 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic001G122600 Sobic001G122600 Sobic004G349550--Sobic001G122600 Sobic007G008500--Sobic001G166900 Sobic006G248000 Sobic006G248000 Sobic007G008500--Sobic006G248000 Sobic007G008500--Sobic004G349550 Sobic007G008500--Sobic002G046000 Sobic010G198900 Sobic010G198900 Sobic007G008500--Sobic010G198900 Sobic007G008500--Sobic006G167700 Sobic007G008500--Sobic009G103800 Sobic007G008500--Sobic002G184700 Sobic007G025600 Sobic007G025600 Sobic007G008500--Sobic007G025600 Sobic002G046000--Sobic002G184700 Sobic002G046000--Sobic006G167700 Sobic003G372600 Sobic003G372600 Sobic002G046000--Sobic003G372600 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G211300 Sobic002G211300 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic001G534200 Sobic001G534200 Sobic009G103800--Sobic001G534200 Sobic001G344300--Sobic009G103800 Sobic001G344300--Sobic002G184700 Sobic001G344300--Sobic006G167700 Sobic001G344300--Sobic004G349550 Sobic001G344300--Sobic002G046000 Sobic001G344300--Sobic001G165600 Sobic001G344300--Sobic001G166900 Sobic001G344300--Sobic003G372600 Sobic001G344300--Sobic002G211300 Sobic002G184700--Sobic009G103800 Sobic002G184700--Sobic006G167700 Sobic002G184700--Sobic001G344300 Sobic002G184700--Sobic002G046000 Sobic002G184700--Sobic003G372600 Sobic002G184700--Sobic001G166900 Sobic002G184700--Sobic002G211300 Sobic001G208500 Sobic001G208500 Sobic002G184700--Sobic001G208500 Sobic002G184700--Sobic004G349550 Sobic008G149300--Sobic001G122600 Sobic006G167700--Sobic002G184700 Sobic006G167700--Sobic009G103800 Sobic006G167700--Sobic001G344300 Sobic006G167700--Sobic001G166900 Sobic006G167700--Sobic001G165600 Sobic006G167700--Sobic002G046000 Sobic006G167700--Sobic002G211300 Sobic006G167700--Sobic003G372600 Sobic006G167700--Sobic004G349550 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900
Octagon: transcription factors


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