Gene annotation
Transcriptome id Sobic.001G164800.1
Synonym Sb01g014370
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt A0A1B6QJA1
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT4G33280 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os03g42430.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK14137
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
2 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
3 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
6 Sobic.002G327600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
7 Sobic.006G248000 polyprenyl synthetase, putative, expressed K00787: farnesyl diphosphate synthase
8 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
9 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
11 Sobic.004G329600 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
12 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.006G167700 oleosin, putative, expressed -
14 Sobic.008G149300 B3 DNA binding domain containing protein, expressed -
15 Sobic.001G498900 expressed protein -
16 Sobic.007G025600 amino acid transporter, putative, expressed -
17 Sobic.001G344300 - -
18 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
19 Sobic.002G184700 expressed protein -
20 Sobic.005G184700 - -


Gene co-expression network
sample Sobic001G164800 Sobic001G164800 Sobic005G054900 Sobic005G054900 Sobic001G164800--Sobic005G054900 Sobic007G008500 Sobic007G008500 Sobic001G164800--Sobic007G008500 Sobic002G046000 Sobic002G046000 Sobic001G164800--Sobic002G046000 Sobic004G349550 Sobic004G349550 Sobic001G164800--Sobic004G349550 Sobic001G166900 Sobic001G166900 Sobic001G164800--Sobic001G166900 Sobic002G327600 Sobic002G327600 Sobic001G164800--Sobic002G327600 Sobic006G248000 Sobic006G248000 Sobic001G164800--Sobic006G248000 Sobic003G443400 Sobic003G443400 Sobic001G164800--Sobic003G443400 Sobic010G256100 Sobic010G256100 Sobic001G164800--Sobic010G256100 Sobic005G054900--Sobic001G164800 Sobic005G054900--Sobic002G046000 Sobic005G054900--Sobic007G008500 Sobic005G054900--Sobic001G166900 Sobic010G110100 Sobic010G110100 Sobic005G054900--Sobic010G110100 Sobic003G398200 Sobic003G398200 Sobic005G054900--Sobic003G398200 Sobic002G184700 Sobic002G184700 Sobic005G054900--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic005G054900--Sobic009G103800 Sobic005G054900--Sobic004G349550 Sobic007G008500--Sobic001G166900 Sobic007G008500--Sobic006G248000 Sobic007G008500--Sobic004G349550 Sobic007G008500--Sobic002G046000 Sobic010G198900 Sobic010G198900 Sobic007G008500--Sobic010G198900 Sobic006G167700 Sobic006G167700 Sobic007G008500--Sobic006G167700 Sobic007G008500--Sobic009G103800 Sobic007G008500--Sobic002G184700 Sobic007G025600 Sobic007G025600 Sobic007G008500--Sobic007G025600 Sobic002G046000--Sobic002G184700 Sobic002G046000--Sobic006G167700 Sobic003G372600 Sobic003G372600 Sobic002G046000--Sobic003G372600 Sobic001G344300 Sobic001G344300 Sobic002G046000--Sobic001G344300 Sobic002G046000--Sobic009G103800 Sobic002G046000--Sobic001G166900 Sobic002G046000--Sobic006G248000 Sobic002G211300 Sobic002G211300 Sobic002G046000--Sobic002G211300 Sobic002G046000--Sobic010G198900 Sobic004G349550--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic005G184700 Sobic005G184700 Sobic004G349550--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G349550--Sobic005G184800 Sobic001G165600 Sobic001G165600 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic001G122600 Sobic001G122600 Sobic004G349550--Sobic001G122600 Sobic001G166900--Sobic006G167700 Sobic001G166900--Sobic002G184700 Sobic001G166900--Sobic006G248000 Sobic001G166900--Sobic002G046000 Sobic001G166900--Sobic009G103800 Sobic001G166900--Sobic001G344300 Sobic001G166900--Sobic003G372600 Sobic001G166900--Sobic002G211300 Sobic001G166900--Sobic010G198900 Sobic002G327600--Sobic006G248000 Sobic010G125000 Sobic010G125000 Sobic002G327600--Sobic010G125000 Sobic002G327600--Sobic001G166900 Sobic002G327600--Sobic001G165600 Sobic002G327600--Sobic002G211300 Sobic002G327600--Sobic008G149300 Sobic002G327600--Sobic004G349550 Sobic002G327600--Sobic006G167700 Sobic002G327600--Sobic010G198900 Sobic006G248000--Sobic002G211300 Sobic006G248000--Sobic010G198900 Sobic006G248000--Sobic010G125000 Sobic006G248000--Sobic003G372600 Sobic006G248000--Sobic006G167700 Sobic006G248000--Sobic001G166900 Sobic006G248000--Sobic002G046000 Sobic006G248000--Sobic002G184700 Sobic001G498900 Sobic001G498900 Sobic006G248000--Sobic001G498900 Sobic006G217800 Sobic006G217800 Sobic003G443400--Sobic006G217800 Sobic001G393101 Sobic001G393101 Sobic003G443400--Sobic001G393101 Sobic003G443400--Sobic004G349550 Sobic003G443400--Sobic008G149300 Sobic003G443400--Sobic009G103800 Sobic003G443400--Sobic006G167700 Sobic003G443400--Sobic001G166900 Sobic003G443400--Sobic001G344300 Sobic003G443400--Sobic005G184700 Sobic003G061500 Sobic003G061500 Sobic010G256100--Sobic003G061500 Sobic004G091600 Sobic004G091600 Sobic010G256100--Sobic004G091600 Sobic009G104500 Sobic009G104500 Sobic010G256100--Sobic009G104500 Sobic007G218500 Sobic007G218500 Sobic010G256100--Sobic007G218500 Sobic010G256100--Sobic002G046000 Sobic010G256100--Sobic004G349550 Sobic005G165700 Sobic005G165700 Sobic010G256100--Sobic005G165700 Sobic010G256100--Sobic007G008500 Sobic010G256100--Sobic003G443400
Octagon: transcription factors


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