Gene annotation
Transcriptome id Sobic.004G329600.1
Synonym Sb04g035870
Functional annotation SMP-30/Gluconolaconase/LRE-like region containing protein, expressed
UniProt A0A1Z5RQ52
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF28
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os06g41850.1 : SMP-30/Gluconolaconase/LRE-like region containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK21204 , KQK10870 , KQJ84488
Barley HORVU7Hr1G028550.2 , HORVU5Hr1G091230.1 , HORVU2Hr1G013460.2 , HORVU2Hr1G013460.1 , HORVU2Hr1G012970.4 , HORVU2Hr1G012970.3 , HORVU2Hr1G012970.2 , HORVU7Hr1G028580.1 , HORVU6Hr1G026020.2 , HORVU6Hr1G026020.3 , HORVU6Hr1G026020.1
Wheat TraesCS2D02G076200 , TraesCS2D02G076000 , TraesCS2D02G076300 , TraesCS7D02G140600 , TraesCS2A02G078000 , TraesCS2A02G260200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G164800 B3 DNA binding domain containing protein, expressed -
2 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.004G000900 expressed protein -
5 Sobic.004G349550 - K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.010G110100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"A transcription factor(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659933)@transcription factor, putative, expressed K14431: transcription factor TGA
7 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
8 Sobic.005G184700 - -
9 Sobic.005G184800 - -
10 Sobic.001G122600 expressed protein -
11 Sobic.001G122600 expressed protein -
12 Sobic.001G122600 expressed protein -
13 Sobic.001G122600 expressed protein -
14 Sobic.001G122600 expressed protein -
15 Sobic.001G122600 expressed protein -
16 Sobic.001G122600 expressed protein -
17 Sobic.001G122600 expressed protein -
18 Sobic.001G122600 expressed protein -
19 Sobic.001G122600 expressed protein -
20 Sobic.001G122600 expressed protein -


Gene co-expression network
sample Sobic004G329600 Sobic004G329600 Sobic001G164800 Sobic001G164800 Sobic004G329600--Sobic001G164800 Sobic005G054900 Sobic005G054900 Sobic004G329600--Sobic005G054900 Sobic010G256100 Sobic010G256100 Sobic004G329600--Sobic010G256100 Sobic004G000900 Sobic004G000900 Sobic004G329600--Sobic004G000900 Sobic004G349550 Sobic004G349550 Sobic004G329600--Sobic004G349550 Sobic010G110100 Sobic010G110100 Sobic004G329600--Sobic010G110100 Sobic003G061500 Sobic003G061500 Sobic004G329600--Sobic003G061500 Sobic005G184700 Sobic005G184700 Sobic004G329600--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G329600--Sobic005G184800 Sobic001G164800--Sobic005G054900 Sobic007G008500 Sobic007G008500 Sobic001G164800--Sobic007G008500 Sobic002G046000 Sobic002G046000 Sobic001G164800--Sobic002G046000 Sobic001G164800--Sobic004G349550 Sobic001G166900 Sobic001G166900 Sobic001G164800--Sobic001G166900 Sobic002G327600 Sobic002G327600 Sobic001G164800--Sobic002G327600 Sobic006G248000 Sobic006G248000 Sobic001G164800--Sobic006G248000 Sobic003G443400 Sobic003G443400 Sobic001G164800--Sobic003G443400 Sobic001G164800--Sobic010G256100 Sobic005G054900--Sobic001G164800 Sobic005G054900--Sobic002G046000 Sobic005G054900--Sobic007G008500 Sobic005G054900--Sobic001G166900 Sobic005G054900--Sobic010G110100 Sobic003G398200 Sobic003G398200 Sobic005G054900--Sobic003G398200 Sobic002G184700 Sobic002G184700 Sobic005G054900--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic005G054900--Sobic009G103800 Sobic005G054900--Sobic004G349550 Sobic010G256100--Sobic003G061500 Sobic004G091600 Sobic004G091600 Sobic010G256100--Sobic004G091600 Sobic009G104500 Sobic009G104500 Sobic010G256100--Sobic009G104500 Sobic007G218500 Sobic007G218500 Sobic010G256100--Sobic007G218500 Sobic010G256100--Sobic002G046000 Sobic010G256100--Sobic004G349550 Sobic005G165700 Sobic005G165700 Sobic010G256100--Sobic005G165700 Sobic010G256100--Sobic007G008500 Sobic010G256100--Sobic003G443400 Sobic001G165600 Sobic001G165600 Sobic004G000900--Sobic001G165600 Sobic010G125000 Sobic010G125000 Sobic004G000900--Sobic010G125000 Sobic002G211300 Sobic002G211300 Sobic004G000900--Sobic002G211300 Sobic002G197700 Sobic002G197700 Sobic004G000900--Sobic002G197700 Sobic006G167700 Sobic006G167700 Sobic004G000900--Sobic006G167700 Sobic008G159000 Sobic008G159000 Sobic004G000900--Sobic008G159000 Sobic004G000900--Sobic001G166900 Sobic001G344300 Sobic001G344300 Sobic004G000900--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic004G000900--Sobic003G372600 Sobic004G349550--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic004G349550--Sobic008G149300 Sobic004G349550--Sobic009G103800 Sobic004G349550--Sobic006G167700 Sobic004G349550--Sobic005G184700 Sobic004G349550--Sobic005G184800 Sobic004G349550--Sobic001G165600 Sobic004G349550--Sobic002G184700 Sobic001G122600 Sobic001G122600 Sobic004G349550--Sobic001G122600 Sobic010G110100--Sobic004G349550 Sobic010G110100--Sobic007G008500 Sobic010G110100--Sobic002G046000 Sobic010G110100--Sobic009G103800 Sobic010G110100--Sobic001G344300 Sobic010G110100--Sobic002G184700 Sobic010G110100--Sobic008G149300 Sobic010G110100--Sobic006G167700 Sobic010G110100--Sobic001G166900 Sobic003G061500--Sobic004G349550 Sobic003G061500--Sobic004G091600 Sobic003G061500--Sobic005G184700 Sobic003G061500--Sobic005G184800 Sobic003G061500--Sobic002G046000 Sobic003G061500--Sobic001G344300 Sobic003G061500--Sobic008G149300 Sobic003G061500--Sobic001G166900 Sobic003G061500--Sobic001G165600 Sobic005G184700--Sobic005G184800 Sobic005G184700--Sobic001G122600 Sobic005G184800--Sobic001G122600
Octagon: transcription factors


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