Gene annotation
Transcriptome id Sobic.002G256900.1
Synonym Sb02g029200, FaTA, AtFaTA
Functional annotation acyl-ACP thioesterase, putative, expressed
UniProt C5X4P4
Pfam PF01643
Panther DB PTHR31727:SF6 PTHR31727
NCBI CDD -
KEGG Orthology K10782; fatty acyl-ACP thioesterase A
Gene Ontology GO:0006633; fatty acid biosynthetic process GO:0016790thiolester hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G25110 : fatA acyl-ACP thioesterase
RAP-DB (Rice) LOC_Os09g32760.1 : acyl-ACP thioesterase, putative, expressed
MaizeGDB (Corn) Zm00025a014295 , Zm00025a047565
Brachypodium KQJ90908
Barley HORVU5Hr1G076030.2
Wheat TraesCS5B02G283400 , TraesCS5D02G291700 , TraesCS5D02G291700 , TraesCS5A02G284400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G226000 expressed protein -
2 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
3 Sobic.004G123200 MYB family transcription factor, putative, expressed -
4 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
5 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
6 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
8 Sobic.001G203350 - -
9 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
10 Sobic.006G083900 PHD-finger domain containing protein, expressed -
11 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
12 Sobic.010G037901 - -
13 Sobic.009G014800 - -
14 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
15 Sobic.005G126701 - -
16 Sobic.003G350400 thaumatin, putative, expressed -
17 Sobic.010G053400 expressed protein -
18 Sobic.001G104500 growth-regulating factor, putative, expressed -
19 Sobic.001G336200 "Grain Length3.2(Ortholog in rice:Adamski et al., 2009(PubMedID : 31659842)@cytochrome P450, putative, expressed -
20 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G256900 Sobic002G256900 Sobic006G226000 Sobic006G226000 Sobic002G256900--Sobic006G226000 Sobic003G086800 Sobic003G086800 Sobic002G256900--Sobic003G086800 Sobic004G123200 Sobic004G123200 Sobic002G256900--Sobic004G123200 Sobic004G347500 Sobic004G347500 Sobic002G256900--Sobic004G347500 Sobic007G160400 Sobic007G160400 Sobic002G256900--Sobic007G160400 Sobic009G012500 Sobic009G012500 Sobic002G256900--Sobic009G012500 Sobic002G240000 Sobic002G240000 Sobic002G256900--Sobic002G240000 Sobic001G203350 Sobic001G203350 Sobic002G256900--Sobic001G203350 Sobic005G021000 Sobic005G021000 Sobic002G256900--Sobic005G021000 Sobic009G031800 Sobic009G031800 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic006G226000--Sobic002G256900 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic003G086800--Sobic010G037901 Sobic003G086800--Sobic007G160400 Sobic003G086800--Sobic006G226000 Sobic003G086800--Sobic002G256900 Sobic004G142400 Sobic004G142400 Sobic003G086800--Sobic004G142400 Sobic009G014800 Sobic009G014800 Sobic003G086800--Sobic009G014800 Sobic003G086800--Sobic004G123200 Sobic006G083900 Sobic006G083900 Sobic003G086800--Sobic006G083900 Sobic003G086800--Sobic001G203350 Sobic004G123200--Sobic002G055800 Sobic004G123200--Sobic009G012500 Sobic004G222150 Sobic004G222150 Sobic004G123200--Sobic004G222150 Sobic004G123200--Sobic006G083900 Sobic004G123200--Sobic006G226000 Sobic004G123200--Sobic002G256900 Sobic006G217800 Sobic006G217800 Sobic004G123200--Sobic006G217800 Sobic002G266300 Sobic002G266300 Sobic004G123200--Sobic002G266300 Sobic001G393101 Sobic001G393101 Sobic004G123200--Sobic001G393101 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic002G232900 Sobic002G232900 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic005G126701 Sobic005G126701 Sobic007G160400--Sobic005G126701 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic007G160400--Sobic003G086800 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic009G012500--Sobic006G217800 Sobic009G012500--Sobic006G083900 Sobic009G012500--Sobic007G008500 Sobic009G012500--Sobic001G393101 Sobic008G149300 Sobic008G149300 Sobic009G012500--Sobic008G149300 Sobic001G166900 Sobic001G166900 Sobic009G012500--Sobic001G166900 Sobic003G443400 Sobic003G443400 Sobic009G012500--Sobic003G443400 Sobic009G012500--Sobic001G534200 Sobic007G025600 Sobic007G025600 Sobic009G012500--Sobic007G025600 Sobic002G240000--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic002G240000--Sobic001G254800 Sobic002G240000--Sobic001G534200 Sobic002G240000--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic002G240000--Sobic009G246250 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550 Sobic001G203350--Sobic010G053400 Sobic001G203350--Sobic009G014800 Sobic001G298032 Sobic001G298032 Sobic001G203350--Sobic001G298032 Sobic001G203350--Sobic006G083900 Sobic006G234433 Sobic006G234433 Sobic001G203350--Sobic006G234433 Sobic001G203350--Sobic008G149300 Sobic001G122600 Sobic001G122600 Sobic001G203350--Sobic001G122600 Sobic005G021000--Sobic001G254800 Sobic005G021000--Sobic006G217800 Sobic005G021000--Sobic003G443400 Sobic005G021000--Sobic007G025600 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic005G021000--Sobic001G166900
Octagon: transcription factors


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