Gene annotation
Transcriptome id Sobic.001G336200.1
Synonym CYP78A5, Sb01g032440, KLU
Functional annotation "Grain Length3.2(Ortholog in rice:Adamski et al., 2009 (PubMedID : 31659842)
cytochrome P450, putative, expressed
UniProt A0A1B6QMI1
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF99
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13710 : cytochrome P450, family 78, subfamily A, polypeptide 5
RAP-DB (Rice) LOC_Os03g30420.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a002878 , Zm00025a005709 , Zm00025a034201 , Zm00025a014411 , Zm00025a000478 , Zm00025a052183
Brachypodium -
Barley HORVU2Hr1G032890.2 , HORVU2Hr1G032890.3
Wheat TraesCS2D02G183000 , TraesCS2B02G201900 , TraesCS2A02G175700
Populus -


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cDNA sequences
Sobic.001G336200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G126701 - -
2 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.001G254800 cytochrome P450, putative, expressed -
4 Sobic.007G025600 amino acid transporter, putative, expressed -
5 Sobic.001G534200 - -
6 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
7 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.001G254700 TPD1, putative, expressed -
9 Sobic.001G261420 - -
10 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
11 Sobic.006G234433 - -
12 Sobic.006G083900 PHD-finger domain containing protein, expressed -
13 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.002G184700 expressed protein -
15 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
16 Sobic.006G167700 oleosin, putative, expressed -
17 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
18 Sobic.001G004600 expressed protein -
19 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
20 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase


Gene co-expression network
sample Sobic001G336200 Sobic001G336200 Sobic005G126701 Sobic005G126701 Sobic001G336200--Sobic005G126701 Sobic005G021000 Sobic005G021000 Sobic001G336200--Sobic005G021000 Sobic001G254800 Sobic001G254800 Sobic001G336200--Sobic001G254800 Sobic007G025600 Sobic007G025600 Sobic001G336200--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic001G336200--Sobic001G534200 Sobic004G347500 Sobic004G347500 Sobic001G336200--Sobic004G347500 Sobic009G103800 Sobic009G103800 Sobic001G336200--Sobic009G103800 Sobic001G254700 Sobic001G254700 Sobic001G336200--Sobic001G254700 Sobic001G261420 Sobic001G261420 Sobic001G336200--Sobic001G261420 Sobic005G126701--Sobic001G254800 Sobic006G083900 Sobic006G083900 Sobic005G126701--Sobic006G083900 Sobic005G126701--Sobic007G025600 Sobic005G126701--Sobic001G534200 Sobic006G234433 Sobic006G234433 Sobic005G126701--Sobic006G234433 Sobic005G126701--Sobic009G103800 Sobic001G166900 Sobic001G166900 Sobic005G126701--Sobic001G166900 Sobic004G349550 Sobic004G349550 Sobic005G126701--Sobic004G349550 Sobic006G167700 Sobic006G167700 Sobic005G126701--Sobic006G167700 Sobic005G021000--Sobic001G254800 Sobic006G217800 Sobic006G217800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic005G021000--Sobic009G103800 Sobic005G021000--Sobic006G167700 Sobic005G021000--Sobic001G166900 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic001G254800--Sobic002G184700 Sobic001G344300 Sobic001G344300 Sobic001G254800--Sobic001G344300 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic007G025600--Sobic001G254800 Sobic007G025600--Sobic009G103800 Sobic007G025600--Sobic006G167700 Sobic007G025600--Sobic004G349550 Sobic007G025600--Sobic001G344300 Sobic007G025600--Sobic008G149300 Sobic007G025600--Sobic002G184700 Sobic007G025600--Sobic001G166900 Sobic007G025600--Sobic001G534200 Sobic001G534200--Sobic006G167700 Sobic001G534200--Sobic002G184700 Sobic001G534200--Sobic009G103800 Sobic001G534200--Sobic001G166900 Sobic001G534200--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic001G534200--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G534200--Sobic001G208500 Sobic002G211300 Sobic002G211300 Sobic001G534200--Sobic002G211300 Sobic001G534200--Sobic010G198900 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic004G347500--Sobic001G534200 Sobic002G232900 Sobic002G232900 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic002G046000 Sobic002G046000 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic009G103800--Sobic001G534200 Sobic003G100000 Sobic003G100000 Sobic001G254700--Sobic003G100000 Sobic009G250500 Sobic009G250500 Sobic001G254700--Sobic009G250500 Sobic005G073700 Sobic005G073700 Sobic001G254700--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic001G254700--Sobic009G103800 Sobic010G131500 Sobic010G131500 Sobic001G254700--Sobic010G131500 Sobic001G254700--Sobic002G184700 Sobic002G204350 Sobic002G204350 Sobic001G261420--Sobic002G204350 Sobic001G261420--Sobic007G191500 Sobic001G122600 Sobic001G122600 Sobic001G261420--Sobic001G122600
Octagon: transcription factors


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