Gene annotation
Transcriptome id Sobic.001G254700.1,Sobic.001G254700.2
Synonym
Functional annotation TPD1, putative, expressed
UniProt A0A1B6QKY0 , A0A1B6QKY1
Pfam -
Panther DB PTHR33184 PTHR33184:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32583 : -
RAP-DB (Rice) LOC_Os10g14020.1 : TPD1, putative, expressed
MaizeGDB (Corn) Zm00025a017823 , Zm00025a007017
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
2 Sobic.009G250500 expressed protein -
3 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
4 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
5 Sobic.007G025600 amino acid transporter, putative, expressed -
6 Sobic.001G254800 cytochrome P450, putative, expressed -
7 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.010G131500 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
9 Sobic.002G184700 expressed protein -
10 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
11 Sobic.005G126701 - -
12 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
13 Sobic.001G534200 - -
14 Sobic.006G167700 oleosin, putative, expressed -
15 Sobic.001G344300 - -
16 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -
18 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
19 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G254700 Sobic001G254700 Sobic003G100000 Sobic003G100000 Sobic001G254700--Sobic003G100000 Sobic009G250500 Sobic009G250500 Sobic001G254700--Sobic009G250500 Sobic005G073700 Sobic005G073700 Sobic001G254700--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic001G254700--Sobic003G398200 Sobic007G025600 Sobic007G025600 Sobic001G254700--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic001G254700--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic001G254700--Sobic009G103800 Sobic010G131500 Sobic010G131500 Sobic001G254700--Sobic010G131500 Sobic002G184700 Sobic002G184700 Sobic001G254700--Sobic002G184700 Sobic003G100000--Sobic001G254700 Sobic003G100000--Sobic009G250500 Sobic003G100000--Sobic005G073700 Sobic003G100000--Sobic003G398200 Sobic010G054800 Sobic010G054800 Sobic003G100000--Sobic010G054800 Sobic003G100000--Sobic010G131500 Sobic003G100000--Sobic007G025600 Sobic003G100000--Sobic001G254800 Sobic007G050900 Sobic007G050900 Sobic003G100000--Sobic007G050900 Sobic009G250500--Sobic010G131500 Sobic009G250500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic009G250500--Sobic003G437400 Sobic001G058800 Sobic001G058800 Sobic009G250500--Sobic001G058800 Sobic003G098800 Sobic003G098800 Sobic009G250500--Sobic003G098800 Sobic003G051400 Sobic003G051400 Sobic009G250500--Sobic003G051400 Sobic006G143600 Sobic006G143600 Sobic009G250500--Sobic006G143600 Sobic006G248100 Sobic006G248100 Sobic009G250500--Sobic006G248100 Sobic009G250500--Sobic003G100000 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic006G047700 Sobic006G047700 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic002G244800 Sobic002G244800 Sobic005G073700--Sobic002G244800 Sobic004G200700 Sobic004G200700 Sobic005G073700--Sobic004G200700 Sobic005G073700--Sobic009G250500 Sobic004G254500 Sobic004G254500 Sobic005G073700--Sobic004G254500 Sobic003G398200--Sobic009G250500 Sobic003G398200--Sobic010G131500 Sobic003G398200--Sobic006G248100 Sobic003G398200--Sobic001G058800 Sobic003G398200--Sobic003G437400 Sobic001G208500 Sobic001G208500 Sobic003G398200--Sobic001G208500 Sobic003G398200--Sobic003G051400 Sobic003G372600 Sobic003G372600 Sobic003G398200--Sobic003G372600 Sobic010G198900 Sobic010G198900 Sobic003G398200--Sobic010G198900 Sobic007G025600--Sobic001G254800 Sobic007G025600--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic007G025600--Sobic006G167700 Sobic004G349550 Sobic004G349550 Sobic007G025600--Sobic004G349550 Sobic001G344300 Sobic001G344300 Sobic007G025600--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic007G025600--Sobic008G149300 Sobic007G025600--Sobic002G184700 Sobic001G166900 Sobic001G166900 Sobic007G025600--Sobic001G166900 Sobic001G534200 Sobic001G534200 Sobic007G025600--Sobic001G534200 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic001G254800--Sobic002G184700 Sobic001G254800--Sobic001G344300 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic009G103800--Sobic002G184700 Sobic009G103800--Sobic001G344300 Sobic009G103800--Sobic006G167700 Sobic002G046000 Sobic002G046000 Sobic009G103800--Sobic002G046000 Sobic009G103800--Sobic004G349550 Sobic009G103800--Sobic001G166900 Sobic009G103800--Sobic007G025600 Sobic009G103800--Sobic003G372600 Sobic009G103800--Sobic001G534200 Sobic010G131500--Sobic003G437400 Sobic010G131500--Sobic003G098800 Sobic010G131500--Sobic009G250500 Sobic010G131500--Sobic003G051400 Sobic010G131500--Sobic001G058800 Sobic001G380800 Sobic001G380800 Sobic010G131500--Sobic001G380800 Sobic010G131500--Sobic003G398200 Sobic010G131500--Sobic006G248100 Sobic004G301800 Sobic004G301800 Sobic010G131500--Sobic004G301800 Sobic002G184700--Sobic009G103800 Sobic002G184700--Sobic006G167700 Sobic002G184700--Sobic001G344300 Sobic002G184700--Sobic002G046000 Sobic002G184700--Sobic003G372600 Sobic002G184700--Sobic001G166900 Sobic002G211300 Sobic002G211300 Sobic002G184700--Sobic002G211300 Sobic002G184700--Sobic001G208500 Sobic002G184700--Sobic004G349550
Octagon: transcription factors


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