Gene annotation
Transcriptome id Sobic.003G100000.4,Sobic.003G100000.5,Sobic.003G100000.2,Sobic.003G100000.3,Sobic.003G100000.1
Synonym BGLU44, Sb03g008350
Functional annotation Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed
UniProt A0A1W0VWK2 , A0A1W0VWL1 , A0A1W0VWJ9 , A0A1W0VWK0 , A0A1B6Q2K6
Pfam PF00232
Panther DB PTHR10353 PTHR10353:SF28
NCBI CDD KOG0626; Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
KEGG Orthology K05350; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G18080 : B-S glucosidase 44
RAP-DB (Rice) LOC_Os01g32364.1 : Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed
MaizeGDB (Corn) Zm00025a035437
Brachypodium PNT74239 , KQK13555
Barley HORVU3Hr1G000590.7 , HORVU3Hr1G000590.6 , HORVU3Hr1G000590.4 , HORVU3Hr1G000590.2 , HORVU3Hr1G000590.1 , HORVU3Hr1G000590.9 , HORVU3Hr1G000590.8
Wheat TraesCSU02G186100 , TraesCS3B02G006000 , TraesCSU02G179700 , TraesCS3D02G006900 , TraesCSU02G179600
Populus -


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cDNA sequences
Sobic.003G100000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G254700 TPD1, putative, expressed -
2 Sobic.009G250500 expressed protein -
3 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
4 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
5 Sobic.010G054800 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.010G131500 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
7 Sobic.007G025600 amino acid transporter, putative, expressed -
8 Sobic.001G254800 cytochrome P450, putative, expressed -
9 Sobic.007G050900 - -
10 Sobic.003G437400 The major cationic peroxidase in sorghum grain (SPC4)(PubMedID : 16650004)@peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.001G058800 cysteine proteinase EP-B 1 precursor, putative, expressed -
12 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
13 Sobic.007G008500 basic helix-loop-helix family protein, putative, expressed -
14 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
15 Sobic.009G103800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@ABA signaling component(PubMedID : 24151305)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.002G184700 expressed protein -
17 Sobic.001G534200 - -
18 Sobic.003G051400 cytochrome c oxidase polypeptide Vc, putative, expressed -
19 Sobic.002G046000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
20 Sobic.005G126701 - -


Gene co-expression network
sample Sobic003G100000 Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic003G100000--Sobic001G254700 Sobic009G250500 Sobic009G250500 Sobic003G100000--Sobic009G250500 Sobic005G073700 Sobic005G073700 Sobic003G100000--Sobic005G073700 Sobic003G398200 Sobic003G398200 Sobic003G100000--Sobic003G398200 Sobic010G054800 Sobic010G054800 Sobic003G100000--Sobic010G054800 Sobic010G131500 Sobic010G131500 Sobic003G100000--Sobic010G131500 Sobic007G025600 Sobic007G025600 Sobic003G100000--Sobic007G025600 Sobic001G254800 Sobic001G254800 Sobic003G100000--Sobic001G254800 Sobic007G050900 Sobic007G050900 Sobic003G100000--Sobic007G050900 Sobic001G254700--Sobic003G100000 Sobic001G254700--Sobic009G250500 Sobic001G254700--Sobic005G073700 Sobic001G254700--Sobic003G398200 Sobic001G254700--Sobic007G025600 Sobic001G254700--Sobic001G254800 Sobic009G103800 Sobic009G103800 Sobic001G254700--Sobic009G103800 Sobic001G254700--Sobic010G131500 Sobic002G184700 Sobic002G184700 Sobic001G254700--Sobic002G184700 Sobic009G250500--Sobic010G131500 Sobic009G250500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic009G250500--Sobic003G437400 Sobic001G058800 Sobic001G058800 Sobic009G250500--Sobic001G058800 Sobic003G098800 Sobic003G098800 Sobic009G250500--Sobic003G098800 Sobic003G051400 Sobic003G051400 Sobic009G250500--Sobic003G051400 Sobic006G143600 Sobic006G143600 Sobic009G250500--Sobic006G143600 Sobic006G248100 Sobic006G248100 Sobic009G250500--Sobic006G248100 Sobic009G250500--Sobic003G100000 Sobic005G073700--Sobic001G254700 Sobic005G073700--Sobic003G100000 Sobic005G073700--Sobic010G054800 Sobic006G047700 Sobic006G047700 Sobic005G073700--Sobic006G047700 Sobic005G073700--Sobic007G050900 Sobic002G244800 Sobic002G244800 Sobic005G073700--Sobic002G244800 Sobic004G200700 Sobic004G200700 Sobic005G073700--Sobic004G200700 Sobic005G073700--Sobic009G250500 Sobic004G254500 Sobic004G254500 Sobic005G073700--Sobic004G254500 Sobic003G398200--Sobic009G250500 Sobic003G398200--Sobic010G131500 Sobic003G398200--Sobic006G248100 Sobic003G398200--Sobic001G058800 Sobic003G398200--Sobic003G437400 Sobic001G208500 Sobic001G208500 Sobic003G398200--Sobic001G208500 Sobic003G398200--Sobic003G051400 Sobic003G372600 Sobic003G372600 Sobic003G398200--Sobic003G372600 Sobic010G198900 Sobic010G198900 Sobic003G398200--Sobic010G198900 Sobic010G054800--Sobic006G047700 Sobic010G054800--Sobic005G073700 Sobic010G054800--Sobic007G050900 Sobic010G195450 Sobic010G195450 Sobic010G054800--Sobic010G195450 Sobic010G054800--Sobic003G100000 Sobic010G054800--Sobic004G254500 Sobic010G054800--Sobic001G254700 Sobic010G054800--Sobic002G244800 Sobic010G054800--Sobic009G250500 Sobic010G131500--Sobic003G437400 Sobic010G131500--Sobic003G098800 Sobic010G131500--Sobic009G250500 Sobic010G131500--Sobic003G051400 Sobic010G131500--Sobic001G058800 Sobic001G380800 Sobic001G380800 Sobic010G131500--Sobic001G380800 Sobic010G131500--Sobic003G398200 Sobic010G131500--Sobic006G248100 Sobic004G301800 Sobic004G301800 Sobic010G131500--Sobic004G301800 Sobic007G025600--Sobic001G254800 Sobic007G025600--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic007G025600--Sobic006G167700 Sobic004G349550 Sobic004G349550 Sobic007G025600--Sobic004G349550 Sobic001G344300 Sobic001G344300 Sobic007G025600--Sobic001G344300 Sobic008G149300 Sobic008G149300 Sobic007G025600--Sobic008G149300 Sobic007G025600--Sobic002G184700 Sobic001G166900 Sobic001G166900 Sobic007G025600--Sobic001G166900 Sobic001G534200 Sobic001G534200 Sobic007G025600--Sobic001G534200 Sobic001G254800--Sobic007G025600 Sobic001G254800--Sobic009G103800 Sobic001G254800--Sobic006G167700 Sobic001G254800--Sobic002G184700 Sobic001G254800--Sobic001G344300 Sobic001G254800--Sobic004G349550 Sobic001G254800--Sobic001G534200 Sobic001G254800--Sobic010G198900 Sobic001G254800--Sobic001G166900 Sobic007G050900--Sobic010G054800 Sobic007G050900--Sobic005G073700 Sobic007G050900--Sobic003G100000 Sobic007G050900--Sobic001G254700 Sobic007G050900--Sobic006G047700 Sobic009G031800 Sobic009G031800 Sobic007G050900--Sobic009G031800 Sobic007G050900--Sobic009G250500 Sobic003G419500 Sobic003G419500 Sobic007G050900--Sobic003G419500 Sobic002G010000 Sobic002G010000 Sobic007G050900--Sobic002G010000
Octagon: transcription factors


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