Gene annotation
Transcriptome id Sobic.004G347500.2,Sobic.004G347500.3
Synonym Sb04g037420
Functional annotation 2-phosphoglycerate kinase-related, putative, expressed
UniProt A0A194YT66 , A0A1Z5RQC5
Pfam PF13671
Panther DB PTHR33477 PTHR33477:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45090 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g57400.1 : 2-phosphoglycerate kinase-related, putative, expressed
MaizeGDB (Corn) Zm00025a016220 , Zm00025a017109 , Zm00025a032783 , Zm00025a001077 , Zm00025a022621
Brachypodium PNT75259 , KQK01388 , KQK01387 , KQK01386
Barley HORVU6Hr1G091300.5 , HORVU6Hr1G091300.4 , HORVU6Hr1G091300.6 , HORVU6Hr1G091300.1 , HORVU6Hr1G091300.2 , HORVU3Hr1G086940.8 , HORVU3Hr1G086940.9 , HORVU3Hr1G086940.6 , HORVU3Hr1G086940.7 , HORVU3Hr1G086940.4 , HORVU3Hr1G086940.5 , HORVU3Hr1G086940.2 , HORVU3Hr1G086940.3 , HORVU3Hr1G086940.1 , HORVU3Hr1G086940.14 , HORVU3Hr1G086940.10 , HORVU3Hr1G086940.12 , HORVU3Hr1G086940.13 , HORVU6Hr1G091300.3
Wheat TraesCS3D02G349800 , TraesCS6B02G434400 , TraesCS6D02G379900 , TraesCS6D02G379900 , TraesCS6A02G394400 , TraesCS6A02G394400 , TraesCS6A02G394400 , TraesCS3A02G355800 , TraesCS3A02G355800 , TraesCS3A02G355800 , TraesCS3B02G388700 , TraesCS3D02G349800 , TraesCS3D02G349800 , TraesCS3B02G388700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
2 Sobic.002G177600 expressed protein -
3 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
4 Sobic.001G004600 expressed protein -
5 Sobic.001G534200 - -
6 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.007G191500 - -
8 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.001G386600 homeobox domain containing protein, expressed -
10 Sobic.001G254800 cytochrome P450, putative, expressed -
11 Sobic.001G261420 - -
12 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
13 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.003G443400 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
15 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
16 Sobic.002G062100 exostosin family protein, putative, expressed -
17 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
18 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
19 Sobic.005G126701 - -
20 Sobic.001G166900 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G347500 Sobic004G347500 Sobic005G021000 Sobic005G021000 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic002G232900 Sobic002G232900 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic001G254800 Sobic001G254800 Sobic005G021000--Sobic001G254800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic007G025600 Sobic007G025600 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic002G177600--Sobic004G347500 Sobic002G177600--Sobic007G191500 Sobic002G177600--Sobic005G021000 Sobic003G395000 Sobic003G395000 Sobic002G177600--Sobic003G395000 Sobic010G125000 Sobic010G125000 Sobic002G177600--Sobic010G125000 Sobic002G197700 Sobic002G197700 Sobic002G177600--Sobic002G197700 Sobic008G159000 Sobic008G159000 Sobic002G177600--Sobic008G159000 Sobic001G165600 Sobic001G165600 Sobic002G177600--Sobic001G165600 Sobic002G211300 Sobic002G211300 Sobic002G177600--Sobic002G211300 Sobic002G240000--Sobic005G021000 Sobic002G240000--Sobic001G254800 Sobic002G240000--Sobic001G534200 Sobic002G240000--Sobic008G149300 Sobic009G246250 Sobic009G246250 Sobic002G240000--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550 Sobic009G025500 Sobic009G025500 Sobic001G004600--Sobic009G025500 Sobic001G261420 Sobic001G261420 Sobic001G004600--Sobic001G261420 Sobic001G004600--Sobic001G165600 Sobic001G122600 Sobic001G122600 Sobic001G004600--Sobic001G122600 Sobic001G534200--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic001G534200--Sobic002G184700 Sobic001G534200--Sobic009G103800 Sobic001G534200--Sobic001G166900 Sobic001G344300 Sobic001G344300 Sobic001G534200--Sobic001G344300 Sobic003G372600 Sobic003G372600 Sobic001G534200--Sobic003G372600 Sobic001G208500 Sobic001G208500 Sobic001G534200--Sobic001G208500 Sobic001G534200--Sobic002G211300 Sobic010G198900 Sobic010G198900 Sobic001G534200--Sobic010G198900 Sobic009G208600 Sobic009G208600 Sobic002G232900--Sobic009G208600 Sobic006G013300 Sobic006G013300 Sobic002G232900--Sobic006G013300 Sobic002G232900--Sobic005G021000 Sobic002G232900--Sobic001G254800 Sobic003G419500 Sobic003G419500 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic004G029900 Sobic004G029900 Sobic002G232900--Sobic004G029900 Sobic002G232900--Sobic002G240000 Sobic005G105600 Sobic005G105600 Sobic002G232900--Sobic005G105600 Sobic007G191500--Sobic001G261420 Sobic007G191500--Sobic001G122600 Sobic006G217800--Sobic003G443400 Sobic001G393101 Sobic001G393101 Sobic006G217800--Sobic001G393101 Sobic006G217800--Sobic001G166900 Sobic006G217800--Sobic006G167700 Sobic006G217800--Sobic002G184700 Sobic006G217800--Sobic009G103800 Sobic006G217800--Sobic008G149300 Sobic006G217800--Sobic001G344300 Sobic006G217800--Sobic001G165600 Sobic001G386600--Sobic001G261420 Sobic008G075350 Sobic008G075350 Sobic001G386600--Sobic008G075350 Sobic001G386600--Sobic007G191500 Sobic002G204350 Sobic002G204350 Sobic001G386600--Sobic002G204350 Sobic001G386600--Sobic001G004600 Sobic001G386600--Sobic005G021000 Sobic001G386600--Sobic004G347500 Sobic001G386600--Sobic001G165600 Sobic001G386600--Sobic001G122600
Octagon: transcription factors


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