Gene annotation
Transcriptome id Sobic.002G177600.2,Sobic.002G177600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QC09
Pfam PF13855 PF07714
Panther DB PTHR27003 PTHR27003:SF45
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G51850 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os09g19350.1 : expressed protein
MaizeGDB (Corn) Zm00025a046621 , Zm00025a046625
Brachypodium PNT64438
Barley HORVU5Hr1G041660.4 , HORVU5Hr1G041660.5 , HORVU5Hr1G041660.6 , HORVU5Hr1G041660.7 , HORVU5Hr1G041660.2 , HORVU5Hr1G041660.3 , HORVU5Hr1G041660.8 , HORVU5Hr1G041660.9
Wheat TraesCS6D02G345600 , TraesCS5D02G193700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
2 Sobic.007G191500 - -
3 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
4 Sobic.003G395000 cysteine proteinase EP-B 1 precursor, putative, expressed -
5 Sobic.010G125000 steroid nuclear receptor, ligand-binding, putative, expressed -
6 Sobic.002G197700 -(PubMedID : 23108465)@ZOS4-05 - C2H2 zinc finger protein, expressed -
7 Sobic.008G159000 - -
8 Sobic.001G165600 THION1 - Plant thionin family protein precursor, putative, expressed -
9 Sobic.002G211300 aminotransferase, classes I and II, domain containing protein, expressed K00814: GPT, alanine transaminase
10 Sobic.001G261420 - -
11 Sobic.001G004600 expressed protein -
12 Sobic.006G055900 expressed protein -
13 Sobic.006G095900 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
14 Sobic.006G167700 oleosin, putative, expressed -
15 Sobic.003G372600 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
16 Sobic.004G164800 poly synthetase 3, putative, expressed K10798: poly [ADP-ribose] polymerase 2/3/4
17 Sobic.009G037100 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed -
18 Sobic.002G184700 expressed protein -
19 Sobic.001G344300 - -
20 Sobic.001G208500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic002G177600 Sobic002G177600 Sobic004G347500 Sobic004G347500 Sobic002G177600--Sobic004G347500 Sobic007G191500 Sobic007G191500 Sobic002G177600--Sobic007G191500 Sobic005G021000 Sobic005G021000 Sobic002G177600--Sobic005G021000 Sobic003G395000 Sobic003G395000 Sobic002G177600--Sobic003G395000 Sobic010G125000 Sobic010G125000 Sobic002G177600--Sobic010G125000 Sobic002G197700 Sobic002G197700 Sobic002G177600--Sobic002G197700 Sobic008G159000 Sobic008G159000 Sobic002G177600--Sobic008G159000 Sobic001G165600 Sobic001G165600 Sobic002G177600--Sobic001G165600 Sobic002G211300 Sobic002G211300 Sobic002G177600--Sobic002G211300 Sobic004G347500--Sobic005G021000 Sobic004G347500--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic002G232900 Sobic002G232900 Sobic004G347500--Sobic002G232900 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic001G261420 Sobic001G261420 Sobic007G191500--Sobic001G261420 Sobic001G122600 Sobic001G122600 Sobic007G191500--Sobic001G122600 Sobic001G254800 Sobic001G254800 Sobic005G021000--Sobic001G254800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic007G025600 Sobic007G025600 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic002G401400 Sobic002G401400 Sobic003G395000--Sobic002G401400 Sobic003G395000--Sobic008G159000 Sobic009G037100 Sobic009G037100 Sobic003G395000--Sobic009G037100 Sobic003G144500 Sobic003G144500 Sobic003G395000--Sobic003G144500 Sobic004G164800 Sobic004G164800 Sobic003G395000--Sobic004G164800 Sobic002G393100 Sobic002G393100 Sobic003G395000--Sobic002G393100 Sobic001G208500 Sobic001G208500 Sobic003G395000--Sobic001G208500 Sobic001G418500 Sobic001G418500 Sobic003G395000--Sobic001G418500 Sobic006G248100 Sobic006G248100 Sobic003G395000--Sobic006G248100 Sobic010G125000--Sobic002G211300 Sobic010G125000--Sobic001G165600 Sobic006G248000 Sobic006G248000 Sobic010G125000--Sobic006G248000 Sobic003G372600 Sobic003G372600 Sobic010G125000--Sobic003G372600 Sobic010G125000--Sobic006G167700 Sobic010G125000--Sobic002G197700 Sobic010G125000--Sobic008G159000 Sobic010G125000--Sobic001G166900 Sobic010G125000--Sobic004G164800 Sobic002G197700--Sobic008G159000 Sobic002G197700--Sobic002G211300 Sobic002G197700--Sobic010G125000 Sobic002G197700--Sobic002G393100 Sobic002G197700--Sobic004G164800 Sobic002G197700--Sobic001G208500 Sobic002G197700--Sobic003G372600 Sobic002G197700--Sobic001G165600 Sobic002G197700--Sobic009G037100 Sobic008G159000--Sobic002G197700 Sobic008G159000--Sobic004G164800 Sobic008G159000--Sobic002G211300 Sobic008G159000--Sobic001G208500 Sobic008G159000--Sobic003G372600 Sobic008G159000--Sobic009G037100 Sobic008G159000--Sobic010G125000 Sobic008G159000--Sobic002G393100 Sobic002G184700 Sobic002G184700 Sobic008G159000--Sobic002G184700 Sobic001G165600--Sobic010G125000 Sobic001G165600--Sobic006G167700 Sobic001G165600--Sobic001G122600 Sobic002G211300--Sobic010G125000 Sobic002G211300--Sobic003G372600 Sobic002G211300--Sobic006G248000 Sobic002G211300--Sobic006G167700 Sobic002G211300--Sobic001G208500 Sobic002G211300--Sobic001G165600 Sobic002G211300--Sobic002G197700 Sobic002G211300--Sobic004G164800 Sobic002G211300--Sobic008G159000
Octagon: transcription factors


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