Gene annotation
Transcriptome id Sobic.001G493100.1
Synonym Sb01g046080
Functional annotation LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5WWV0
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44300 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g07100.1 : LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000822
Brachypodium KQK20448 , KQK23460
Barley HORVU0Hr1G016430.8 , HORVU0Hr1G016430.4 , HORVU0Hr1G016430.5 , HORVU0Hr1G016430.6 , HORVU0Hr1G016430.7 , HORVU0Hr1G016430.1 , HORVU0Hr1G016430.2 , HORVU0Hr1G016430.3 , HORVU4Hr1G074480.1 , HORVU4Hr1G074480.3 , HORVU4Hr1G074480.2 , HORVU4Hr1G074480.5 , HORVU4Hr1G074480.4
Wheat TraesCS4A02G021300 , TraesCS6A02G260600 , TraesCS4D02G280900 , TraesCS6B02G287900 , TraesCS6D02G241400
Populus -


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cDNA sequences
Sobic.001G493100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172000 pectinesterase, putative, expressed -
2 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.006G226000 expressed protein -
4 Sobic.006G041700 sex determination protein tasselseed-2, putative, expressed -
5 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
7 Sobic.010G037901 - -
8 Sobic.003G086800 ZOS1-02 - C2H2 zinc finger protein, expressed -
9 Sobic.009G031800 - -
10 Sobic.004G330200 "TGW6(Ortholog in rice:Ishimaru et al., 2013)"(PubMedID : 31659893)@SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
11 Sobic.002G175200 A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
12 Sobic.001G246600 MBTB37 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.002G259200 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
16 Sobic.004G123200 MYB family transcription factor, putative, expressed -
17 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
18 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
20 Sobic.002G256900 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A


Gene co-expression network
sample Sobic001G493100 Sobic001G493100 Sobic006G172000 Sobic006G172000 Sobic001G493100--Sobic006G172000 Sobic006G135800 Sobic006G135800 Sobic001G493100--Sobic006G135800 Sobic006G226000 Sobic006G226000 Sobic001G493100--Sobic006G226000 Sobic006G041700 Sobic006G041700 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic007G160400 Sobic007G160400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic001G493100--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic001G493100--Sobic009G031800 Sobic006G172000--Sobic001G493100 Sobic003G251700 Sobic003G251700 Sobic006G172000--Sobic003G251700 Sobic006G172000--Sobic006G135800 Sobic006G172000--Sobic006G041700 Sobic007G097100 Sobic007G097100 Sobic006G172000--Sobic007G097100 Sobic004G330200 Sobic004G330200 Sobic006G172000--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic006G172000--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic006G172000--Sobic001G246600 Sobic006G172000--Sobic006G226000 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G135800--Sobic006G172000 Sobic009G002200 Sobic009G002200 Sobic006G135800--Sobic009G002200 Sobic005G153000 Sobic005G153000 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic006G135800--Sobic009G031800 Sobic006G135800--Sobic007G160400 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic002G055800 Sobic002G055800 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic006G041700--Sobic001G493100 Sobic006G041700--Sobic006G172000 Sobic006G041700--Sobic006G197400 Sobic006G041700--Sobic003G086800 Sobic006G041700--Sobic001G246600 Sobic006G041700--Sobic002G175200 Sobic006G041700--Sobic004G330200 Sobic003G350400 Sobic003G350400 Sobic006G041700--Sobic003G350400 Sobic002G259200 Sobic002G259200 Sobic006G041700--Sobic002G259200 Sobic006G197400--Sobic001G493100 Sobic001G199200 Sobic001G199200 Sobic006G197400--Sobic001G199200 Sobic006G197400--Sobic006G041700 Sobic006G255300 Sobic006G255300 Sobic006G197400--Sobic006G255300 Sobic006G197400--Sobic003G086800 Sobic006G016700 Sobic006G016700 Sobic006G197400--Sobic006G016700 Sobic006G197400--Sobic006G172000 Sobic006G197400--Sobic001G246600 Sobic006G197400--Sobic002G175200 Sobic004G142400 Sobic004G142400 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic005G126701 Sobic005G126701 Sobic007G160400--Sobic005G126701 Sobic006G083900 Sobic006G083900 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic007G160400--Sobic003G086800 Sobic009G012500 Sobic009G012500 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic005G196600 Sobic005G196600 Sobic010G037901--Sobic005G196600 Sobic010G037901--Sobic006G226000 Sobic010G037901--Sobic003G086800 Sobic010G037901--Sobic009G031800 Sobic009G188600 Sobic009G188600 Sobic010G037901--Sobic009G188600 Sobic010G037901--Sobic005G153000 Sobic010G037901--Sobic006G135800 Sobic010G037901--Sobic007G160400 Sobic004G282601 Sobic004G282601 Sobic010G037901--Sobic004G282601 Sobic003G086800--Sobic010G037901 Sobic003G086800--Sobic007G160400 Sobic003G086800--Sobic006G226000 Sobic003G086800--Sobic002G256900 Sobic003G086800--Sobic004G142400 Sobic009G014800 Sobic009G014800 Sobic003G086800--Sobic009G014800 Sobic003G086800--Sobic004G123200 Sobic003G086800--Sobic006G083900 Sobic001G203350 Sobic001G203350 Sobic003G086800--Sobic001G203350 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G031800--Sobic009G012500 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200
Octagon: transcription factors


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