Gene annotation
Transcriptome id Sobic.010G214800.1
Synonym Sb10g026120
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5Z782
Pfam PF04535
Panther DB PTHR11615 PTHR11615:SF153
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25830 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os06g44610.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019182 , Zm00025a051701
Brachypodium KQJ93617 , KQK16885
Barley HORVU6Hr1G030310.2 , HORVU6Hr1G030310.1 , HORVU6Hr1G030310.5 , HORVU6Hr1G030310.4 , HORVU7Hr1G111140.5 , HORVU7Hr1G111140.1 , HORVU7Hr1G111140.3 , HORVU7Hr1G111140.2
Wheat TraesCS7B02G401000 , TraesCS7D02G483600 , TraesCS7A02G496400
Populus -


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cDNA sequences
Sobic.010G214800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
2 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.009G031800 - -
4 Sobic.007G160400 ZF-HD homeobox protein, putative, expressed -
5 Sobic.006G226000 expressed protein -
6 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
7 Sobic.005G054900 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
8 Sobic.004G291200 - -
9 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
10 Sobic.005G126701 - -
11 Sobic.009G224300 expressed protein -
12 Sobic.004G123200 MYB family transcription factor, putative, expressed -
13 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
15 Sobic.009G012500 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
16 Sobic.007G082000 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G398200 B3 DNA binding domain containing protein, expressed -
19 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G050900 - -


Gene co-expression network
sample Sobic010G214800 Sobic010G214800 Sobic001G320000 Sobic001G320000 Sobic010G214800--Sobic001G320000 Sobic001G493100 Sobic001G493100 Sobic010G214800--Sobic001G493100 Sobic009G031800 Sobic009G031800 Sobic010G214800--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic010G214800--Sobic007G160400 Sobic006G226000 Sobic006G226000 Sobic010G214800--Sobic006G226000 Sobic002G010000 Sobic002G010000 Sobic010G214800--Sobic002G010000 Sobic005G054900 Sobic005G054900 Sobic010G214800--Sobic005G054900 Sobic004G291200 Sobic004G291200 Sobic010G214800--Sobic004G291200 Sobic007G097100 Sobic007G097100 Sobic010G214800--Sobic007G097100 Sobic001G320000--Sobic007G097100 Sobic001G320000--Sobic007G160400 Sobic001G320000--Sobic001G493100 Sobic001G320000--Sobic010G214800 Sobic001G320000--Sobic009G031800 Sobic001G320000--Sobic006G226000 Sobic002G055800 Sobic002G055800 Sobic001G320000--Sobic002G055800 Sobic006G135800 Sobic006G135800 Sobic001G320000--Sobic006G135800 Sobic004G142400 Sobic004G142400 Sobic001G320000--Sobic004G142400 Sobic006G172000 Sobic006G172000 Sobic001G493100--Sobic006G172000 Sobic001G493100--Sobic006G135800 Sobic001G493100--Sobic006G226000 Sobic006G041700 Sobic006G041700 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic001G493100--Sobic003G086800 Sobic001G493100--Sobic009G031800 Sobic009G031800--Sobic006G226000 Sobic009G031800--Sobic007G160400 Sobic009G031800--Sobic010G037901 Sobic009G012500 Sobic009G012500 Sobic009G031800--Sobic009G012500 Sobic005G126701 Sobic005G126701 Sobic009G031800--Sobic005G126701 Sobic001G254700 Sobic001G254700 Sobic009G031800--Sobic001G254700 Sobic006G083900 Sobic006G083900 Sobic009G031800--Sobic006G083900 Sobic007G025600 Sobic007G025600 Sobic009G031800--Sobic007G025600 Sobic001G534200 Sobic001G534200 Sobic009G031800--Sobic001G534200 Sobic007G160400--Sobic004G142400 Sobic007G160400--Sobic006G226000 Sobic007G160400--Sobic005G126701 Sobic007G160400--Sobic006G083900 Sobic007G008500 Sobic007G008500 Sobic007G160400--Sobic007G008500 Sobic007G160400--Sobic003G086800 Sobic007G160400--Sobic009G012500 Sobic007G160400--Sobic009G031800 Sobic010G110100 Sobic010G110100 Sobic007G160400--Sobic010G110100 Sobic006G226000--Sobic009G031800 Sobic006G226000--Sobic007G160400 Sobic006G226000--Sobic010G037901 Sobic006G226000--Sobic002G055800 Sobic002G256900 Sobic002G256900 Sobic006G226000--Sobic002G256900 Sobic004G123200 Sobic004G123200 Sobic006G226000--Sobic004G123200 Sobic006G226000--Sobic003G086800 Sobic002G240000 Sobic002G240000 Sobic006G226000--Sobic002G240000 Sobic001G136400 Sobic001G136400 Sobic006G226000--Sobic001G136400 Sobic009G250500 Sobic009G250500 Sobic002G010000--Sobic009G250500 Sobic010G131500 Sobic010G131500 Sobic002G010000--Sobic010G131500 Sobic003G398200 Sobic003G398200 Sobic002G010000--Sobic003G398200 Sobic002G010000--Sobic001G254700 Sobic003G437400 Sobic003G437400 Sobic002G010000--Sobic003G437400 Sobic003G100000 Sobic003G100000 Sobic002G010000--Sobic003G100000 Sobic003G098800 Sobic003G098800 Sobic002G010000--Sobic003G098800 Sobic002G010000--Sobic001G534200 Sobic003G051400 Sobic003G051400 Sobic002G010000--Sobic003G051400 Sobic001G164800 Sobic001G164800 Sobic005G054900--Sobic001G164800 Sobic002G046000 Sobic002G046000 Sobic005G054900--Sobic002G046000 Sobic005G054900--Sobic007G008500 Sobic001G166900 Sobic001G166900 Sobic005G054900--Sobic001G166900 Sobic005G054900--Sobic010G110100 Sobic005G054900--Sobic003G398200 Sobic002G184700 Sobic002G184700 Sobic005G054900--Sobic002G184700 Sobic009G103800 Sobic009G103800 Sobic005G054900--Sobic009G103800 Sobic004G349550 Sobic004G349550 Sobic005G054900--Sobic004G349550 Sobic004G291200--Sobic004G123200 Sobic004G291200--Sobic009G012500 Sobic010G024600 Sobic010G024600 Sobic004G291200--Sobic010G024600 Sobic002G266300 Sobic002G266300 Sobic004G291200--Sobic002G266300 Sobic006G217800 Sobic006G217800 Sobic004G291200--Sobic006G217800 Sobic009G241900 Sobic009G241900 Sobic004G291200--Sobic009G241900 Sobic005G078132 Sobic005G078132 Sobic004G291200--Sobic005G078132 Sobic005G021000 Sobic005G021000 Sobic004G291200--Sobic005G021000 Sobic003G427200 Sobic003G427200 Sobic004G291200--Sobic003G427200 Sobic007G097100--Sobic006G172000 Sobic007G097100--Sobic001G320000 Sobic007G097100--Sobic001G493100 Sobic007G097100--Sobic004G142400 Sobic007G097100--Sobic007G160400 Sobic007G097100--Sobic006G226000 Sobic003G350400 Sobic003G350400 Sobic007G097100--Sobic003G350400 Sobic007G097100--Sobic006G135800 Sobic007G097100--Sobic006G041700
Octagon: transcription factors


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