Gene annotation
Transcriptome id Sobic.009G224300.2,Sobic.009G224300.1
Synonym Sb09g027780
Functional annotation expressed protein
UniProt C5YV10
Pfam -
Panther DB PTHR36786 PTHR36786:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27510 : -
RAP-DB (Rice) LOC_Os02g26300.1 : expressed protein
MaizeGDB (Corn) Zm00025a044482
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
2 Sobic.006G016700 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
3 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.001G493100 LTPL82 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.007G219100 phosphatidylinositol transfer, putative, expressed -
6 Sobic.009G207400 ATP binding protein, putative, expressed -
7 Sobic.003G350400 thaumatin, putative, expressed -
8 Sobic.007G082000 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.010G257000 two-component response regulator, putative, expressed -
10 Sobic.004G123200 MYB family transcription factor, putative, expressed -
11 Sobic.005G138000 zinc knuckle domain containing protein, expressed -
12 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
13 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
15 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.009G200000 expressed protein -
17 Sobic.002G378600 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
18 Sobic.004G291200 - -
19 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -


Gene co-expression network
sample Sobic009G224300 Sobic009G224300 Sobic003G147500 Sobic003G147500 Sobic009G224300--Sobic003G147500 Sobic006G016700 Sobic006G016700 Sobic009G224300--Sobic006G016700 Sobic004G286200 Sobic004G286200 Sobic009G224300--Sobic004G286200 Sobic001G493100 Sobic001G493100 Sobic009G224300--Sobic001G493100 Sobic007G219100 Sobic007G219100 Sobic009G224300--Sobic007G219100 Sobic009G207400 Sobic009G207400 Sobic009G224300--Sobic009G207400 Sobic003G350400 Sobic003G350400 Sobic009G224300--Sobic003G350400 Sobic007G082000 Sobic007G082000 Sobic009G224300--Sobic007G082000 Sobic010G257000 Sobic010G257000 Sobic009G224300--Sobic010G257000 Sobic003G147500--Sobic006G016700 Sobic006G275500 Sobic006G275500 Sobic003G147500--Sobic006G275500 Sobic003G147500--Sobic009G224300 Sobic008G090000 Sobic008G090000 Sobic003G147500--Sobic008G090000 Sobic010G250400 Sobic010G250400 Sobic003G147500--Sobic010G250400 Sobic002G168000 Sobic002G168000 Sobic003G147500--Sobic002G168000 Sobic003G147500--Sobic007G219100 Sobic004G123200 Sobic004G123200 Sobic003G147500--Sobic004G123200 Sobic009G146250 Sobic009G146250 Sobic003G147500--Sobic009G146250 Sobic006G016700--Sobic003G147500 Sobic006G016700--Sobic006G275500 Sobic002G256900 Sobic002G256900 Sobic006G016700--Sobic002G256900 Sobic006G226000 Sobic006G226000 Sobic006G016700--Sobic006G226000 Sobic007G050800 Sobic007G050800 Sobic006G016700--Sobic007G050800 Sobic006G016700--Sobic002G168000 Sobic007G187700 Sobic007G187700 Sobic006G016700--Sobic007G187700 Sobic008G052300 Sobic008G052300 Sobic006G016700--Sobic008G052300 Sobic005G153000 Sobic005G153000 Sobic006G016700--Sobic005G153000 Sobic008G118100 Sobic008G118100 Sobic004G286200--Sobic008G118100 Sobic009G225500 Sobic009G225500 Sobic004G286200--Sobic009G225500 Sobic004G286200--Sobic009G224300 Sobic004G286200--Sobic001G493100 Sobic002G187600 Sobic002G187600 Sobic004G286200--Sobic002G187600 Sobic004G286200--Sobic007G050800 Sobic004G286200--Sobic006G016700 Sobic006G135800 Sobic006G135800 Sobic004G286200--Sobic006G135800 Sobic007G097100 Sobic007G097100 Sobic004G286200--Sobic007G097100 Sobic006G172000 Sobic006G172000 Sobic001G493100--Sobic006G172000 Sobic001G493100--Sobic006G135800 Sobic001G493100--Sobic006G226000 Sobic006G041700 Sobic006G041700 Sobic001G493100--Sobic006G041700 Sobic006G197400 Sobic006G197400 Sobic001G493100--Sobic006G197400 Sobic007G160400 Sobic007G160400 Sobic001G493100--Sobic007G160400 Sobic010G037901 Sobic010G037901 Sobic001G493100--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic001G493100--Sobic003G086800 Sobic009G031800 Sobic009G031800 Sobic001G493100--Sobic009G031800 Sobic007G219100--Sobic003G147500 Sobic003G292700 Sobic003G292700 Sobic007G219100--Sobic003G292700 Sobic003G409600 Sobic003G409600 Sobic007G219100--Sobic003G409600 Sobic007G219100--Sobic009G224300 Sobic001G407100 Sobic001G407100 Sobic007G219100--Sobic001G407100 Sobic007G219100--Sobic009G225500 Sobic006G255300 Sobic006G255300 Sobic007G219100--Sobic006G255300 Sobic007G219100--Sobic010G250400 Sobic007G219100--Sobic006G016700 Sobic005G163400 Sobic005G163400 Sobic009G207400--Sobic005G163400 Sobic009G200000 Sobic009G200000 Sobic009G207400--Sobic009G200000 Sobic008G042200 Sobic008G042200 Sobic009G207400--Sobic008G042200 Sobic005G092700 Sobic005G092700 Sobic009G207400--Sobic005G092700 Sobic009G207400--Sobic010G250400 Sobic001G244900 Sobic001G244900 Sobic009G207400--Sobic001G244900 Sobic009G207400--Sobic003G147500 Sobic003G104100 Sobic003G104100 Sobic009G207400--Sobic003G104100 Sobic009G207400--Sobic008G052300 Sobic003G350400--Sobic002G256900 Sobic003G350400--Sobic006G016700 Sobic003G350400--Sobic007G097100 Sobic004G311600 Sobic004G311600 Sobic003G350400--Sobic004G311600 Sobic003G350400--Sobic006G041700 Sobic004G330200 Sobic004G330200 Sobic003G350400--Sobic004G330200 Sobic002G175200 Sobic002G175200 Sobic003G350400--Sobic002G175200 Sobic001G246600 Sobic001G246600 Sobic003G350400--Sobic001G246600 Sobic004G142400 Sobic004G142400 Sobic003G350400--Sobic004G142400 Sobic007G082000--Sobic009G224300 Sobic003G326500 Sobic003G326500 Sobic007G082000--Sobic003G326500 Sobic010G214800 Sobic010G214800 Sobic007G082000--Sobic010G214800 Sobic004G200700 Sobic004G200700 Sobic007G082000--Sobic004G200700 Sobic006G262501 Sobic006G262501 Sobic007G082000--Sobic006G262501 Sobic007G050900 Sobic007G050900 Sobic007G082000--Sobic007G050900 Sobic002G367200 Sobic002G367200 Sobic007G082000--Sobic002G367200 Sobic003G184666 Sobic003G184666 Sobic007G082000--Sobic003G184666 Sobic002G266300 Sobic002G266300 Sobic007G082000--Sobic002G266300 Sobic009G188900 Sobic009G188900 Sobic010G257000--Sobic009G188900 Sobic010G175000 Sobic010G175000 Sobic010G257000--Sobic010G175000 Sobic010G257000--Sobic002G168000 Sobic010G257000--Sobic009G224300 Sobic001G027500 Sobic001G027500 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic006G281900 Sobic006G281900 Sobic010G257000--Sobic006G281900 Sobic010G257000--Sobic010G250400 Sobic010G257000--Sobic006G016700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.