Gene annotation
Transcriptome id Sobic.007G082000.1
Synonym BPM1, ATBPM1, Sb07g006600
Functional annotation MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1B6PGE0
Pfam PF00917 PF00651
Panther DB PTHR26379 PTHR26379:SF154
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os08g13030.1 : MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95648
Barley HORVU6Hr1G069480.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G224300 expressed protein -
2 Sobic.003G326500 apurinic endonuclease-redox protein, putative, expressed K01142: E3.1.11.2, exodeoxyribonuclease III
3 Sobic.010G214800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
4 Sobic.004G200700 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.006G262501 - -
6 Sobic.007G050900 - -
7 Sobic.002G367200 RNA-binding protein-like, putative, expressed -
8 Sobic.003G184666 - -
9 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
10 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
11 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
12 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
13 Sobic.004G291200 - -
14 Sobic.004G286200 DUF630/DUF632 domains containing protein, putative, expressed -
15 Sobic.002G187600 expressed protein -
16 Sobic.005G073700 OsFBX408 - F-box domain containing protein, expressed -
17 Sobic.003G100000 Os1bglu1 - beta-mannosidase/glucosidase homologue, expressed K05350: beta-glucosidase
18 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
19 Sobic.004G123200 MYB family transcription factor, putative, expressed -
20 Sobic.001G254700 TPD1, putative, expressed -


Gene co-expression network
sample Sobic007G082000 Sobic007G082000 Sobic009G224300 Sobic009G224300 Sobic007G082000--Sobic009G224300 Sobic003G326500 Sobic003G326500 Sobic007G082000--Sobic003G326500 Sobic010G214800 Sobic010G214800 Sobic007G082000--Sobic010G214800 Sobic004G200700 Sobic004G200700 Sobic007G082000--Sobic004G200700 Sobic006G262501 Sobic006G262501 Sobic007G082000--Sobic006G262501 Sobic007G050900 Sobic007G050900 Sobic007G082000--Sobic007G050900 Sobic002G367200 Sobic002G367200 Sobic007G082000--Sobic002G367200 Sobic003G184666 Sobic003G184666 Sobic007G082000--Sobic003G184666 Sobic002G266300 Sobic002G266300 Sobic007G082000--Sobic002G266300 Sobic003G147500 Sobic003G147500 Sobic009G224300--Sobic003G147500 Sobic006G016700 Sobic006G016700 Sobic009G224300--Sobic006G016700 Sobic004G286200 Sobic004G286200 Sobic009G224300--Sobic004G286200 Sobic001G493100 Sobic001G493100 Sobic009G224300--Sobic001G493100 Sobic007G219100 Sobic007G219100 Sobic009G224300--Sobic007G219100 Sobic009G207400 Sobic009G207400 Sobic009G224300--Sobic009G207400 Sobic003G350400 Sobic003G350400 Sobic009G224300--Sobic003G350400 Sobic009G224300--Sobic007G082000 Sobic010G257000 Sobic010G257000 Sobic009G224300--Sobic010G257000 Sobic003G183466 Sobic003G183466 Sobic003G326500--Sobic003G183466 Sobic009G178500 Sobic009G178500 Sobic003G326500--Sobic009G178500 Sobic002G095300 Sobic002G095300 Sobic003G326500--Sobic002G095300 Sobic008G141900 Sobic008G141900 Sobic003G326500--Sobic008G141900 Sobic003G326500--Sobic007G082000 Sobic002G383700 Sobic002G383700 Sobic003G326500--Sobic002G383700 Sobic004G291200 Sobic004G291200 Sobic003G326500--Sobic004G291200 Sobic002G286632 Sobic002G286632 Sobic003G326500--Sobic002G286632 Sobic003G045450 Sobic003G045450 Sobic003G326500--Sobic003G045450 Sobic001G320000 Sobic001G320000 Sobic010G214800--Sobic001G320000 Sobic010G214800--Sobic001G493100 Sobic009G031800 Sobic009G031800 Sobic010G214800--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic010G214800--Sobic007G160400 Sobic006G226000 Sobic006G226000 Sobic010G214800--Sobic006G226000 Sobic002G010000 Sobic002G010000 Sobic010G214800--Sobic002G010000 Sobic005G054900 Sobic005G054900 Sobic010G214800--Sobic005G054900 Sobic010G214800--Sobic004G291200 Sobic007G097100 Sobic007G097100 Sobic010G214800--Sobic007G097100 Sobic003G100000 Sobic003G100000 Sobic004G200700--Sobic003G100000 Sobic001G254700 Sobic001G254700 Sobic004G200700--Sobic001G254700 Sobic003G427000 Sobic003G427000 Sobic004G200700--Sobic003G427000 Sobic005G073700 Sobic005G073700 Sobic004G200700--Sobic005G073700 Sobic009G241900 Sobic009G241900 Sobic004G200700--Sobic009G241900 Sobic003G398200 Sobic003G398200 Sobic004G200700--Sobic003G398200 Sobic010G054800 Sobic010G054800 Sobic004G200700--Sobic010G054800 Sobic004G200700--Sobic002G266300 Sobic009G012500 Sobic009G012500 Sobic004G200700--Sobic009G012500 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic005G036200 Sobic005G036200 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic009G012600 Sobic009G012600 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic010G175000 Sobic010G175000 Sobic006G262501--Sobic010G175000 Sobic007G050900--Sobic010G054800 Sobic007G050900--Sobic005G073700 Sobic007G050900--Sobic003G100000 Sobic007G050900--Sobic001G254700 Sobic006G047700 Sobic006G047700 Sobic007G050900--Sobic006G047700 Sobic007G050900--Sobic009G031800 Sobic009G250500 Sobic009G250500 Sobic007G050900--Sobic009G250500 Sobic003G419500 Sobic003G419500 Sobic007G050900--Sobic003G419500 Sobic007G050900--Sobic002G010000 Sobic009G028100 Sobic009G028100 Sobic002G367200--Sobic009G028100 Sobic003G122800 Sobic003G122800 Sobic002G367200--Sobic003G122800 Sobic003G102700 Sobic003G102700 Sobic002G367200--Sobic003G102700 Sobic002G367200--Sobic002G095300 Sobic007G199800 Sobic007G199800 Sobic002G367200--Sobic007G199800 Sobic002G367200--Sobic007G050800 Sobic005G068800 Sobic005G068800 Sobic002G367200--Sobic005G068800 Sobic002G367200--Sobic009G224300 Sobic002G367200--Sobic007G082000 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic005G078700 Sobic005G078700 Sobic003G184666--Sobic005G078700 Sobic010G143600 Sobic010G143600 Sobic003G184666--Sobic010G143600 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G325900 Sobic003G325900 Sobic003G184666--Sobic003G325900 Sobic003G184666--Sobic003G045450 Sobic002G362200 Sobic002G362200 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150 Sobic006G217800 Sobic006G217800 Sobic002G266300--Sobic006G217800 Sobic005G021000 Sobic005G021000 Sobic002G266300--Sobic005G021000 Sobic001G534200 Sobic001G534200 Sobic002G266300--Sobic001G534200 Sobic001G254800 Sobic001G254800 Sobic002G266300--Sobic001G254800 Sobic001G125400 Sobic001G125400 Sobic002G266300--Sobic001G125400 Sobic009G025500 Sobic009G025500 Sobic002G266300--Sobic009G025500 Sobic007G053100 Sobic007G053100 Sobic002G266300--Sobic007G053100 Sobic002G266300--Sobic003G398200 Sobic006G208000 Sobic006G208000 Sobic002G266300--Sobic006G208000
Octagon: transcription factors


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