Gene annotation
Transcriptome id Sobic.007G199800.1,Sobic.007G199800.3,Sobic.007G199800.4,Sobic.007G199800.5
Synonym BPM1, ATBPM1, Sb07g026757
Functional annotation BTB/POZ domain containing protein, expressed
UniProt A0A1B6PIS2 , A0A1Z5RAR2 , A0A1Z5RAR5
Pfam PF00651
Panther DB PTHR24413 PTHR24413:SF136
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os08g41220.1 : BTB/POZ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030370
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G060600 - -
2 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
3 Sobic.003G236150 - -
4 Sobic.005G036200 protein of unknown function containing protein, expressed -
5 Sobic.002G367200 RNA-binding protein-like, putative, expressed -
6 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
7 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
9 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
10 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
12 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
13 Sobic.001G366300 telomerase reverse transcriptase, putative, expressed K11126: TERT, telomerase reverse transcriptase
14 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
15 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
17 Sobic.002G168000 expressed protein -
18 Sobic.006G226000 expressed protein -
19 Sobic.001G136400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Desulfoglucosinolate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
20 Sobic.004G282601 - -


Gene co-expression network
sample Sobic007G199800 Sobic007G199800 Sobic009G060600 Sobic009G060600 Sobic007G199800--Sobic009G060600 Sobic007G050800 Sobic007G050800 Sobic007G199800--Sobic007G050800 Sobic003G236150 Sobic003G236150 Sobic007G199800--Sobic003G236150 Sobic005G036200 Sobic005G036200 Sobic007G199800--Sobic005G036200 Sobic002G367200 Sobic002G367200 Sobic007G199800--Sobic002G367200 Sobic002G055800 Sobic002G055800 Sobic007G199800--Sobic002G055800 Sobic007G192200 Sobic007G192200 Sobic007G199800--Sobic007G192200 Sobic009G002200 Sobic009G002200 Sobic007G199800--Sobic009G002200 Sobic009G012600 Sobic009G012600 Sobic007G199800--Sobic009G012600 Sobic010G074940 Sobic010G074940 Sobic009G060600--Sobic010G074940 Sobic002G177600 Sobic002G177600 Sobic009G060600--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic009G060600--Sobic002G240000 Sobic005G021000 Sobic005G021000 Sobic009G060600--Sobic005G021000 Sobic004G347500 Sobic004G347500 Sobic009G060600--Sobic004G347500 Sobic004G301800 Sobic004G301800 Sobic009G060600--Sobic004G301800 Sobic002G393100 Sobic002G393100 Sobic009G060600--Sobic002G393100 Sobic001G380800 Sobic001G380800 Sobic009G060600--Sobic001G380800 Sobic006G208000 Sobic006G208000 Sobic009G060600--Sobic006G208000 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic008G118100 Sobic008G118100 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic002G168000 Sobic002G168000 Sobic007G050800--Sobic002G168000 Sobic005G153000 Sobic005G153000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G187700 Sobic007G187700 Sobic007G050800--Sobic007G187700 Sobic007G050800--Sobic009G012600 Sobic003G236150--Sobic007G199800 Sobic006G281900 Sobic006G281900 Sobic003G236150--Sobic006G281900 Sobic003G236150--Sobic007G187700 Sobic003G236150--Sobic007G050800 Sobic003G236150--Sobic002G168000 Sobic010G175000 Sobic010G175000 Sobic003G236150--Sobic010G175000 Sobic006G262501 Sobic006G262501 Sobic003G236150--Sobic006G262501 Sobic001G264201 Sobic001G264201 Sobic003G236150--Sobic001G264201 Sobic003G290400 Sobic003G290400 Sobic003G236150--Sobic003G290400 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic004G242200 Sobic004G242200 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic009G028100 Sobic009G028100 Sobic002G367200--Sobic009G028100 Sobic003G122800 Sobic003G122800 Sobic002G367200--Sobic003G122800 Sobic003G102700 Sobic003G102700 Sobic002G367200--Sobic003G102700 Sobic002G095300 Sobic002G095300 Sobic002G367200--Sobic002G095300 Sobic002G367200--Sobic007G199800 Sobic002G367200--Sobic007G050800 Sobic005G068800 Sobic005G068800 Sobic002G367200--Sobic005G068800 Sobic009G224300 Sobic009G224300 Sobic002G367200--Sobic009G224300 Sobic007G082000 Sobic007G082000 Sobic002G367200--Sobic007G082000 Sobic004G123200 Sobic004G123200 Sobic002G055800--Sobic004G123200 Sobic002G055800--Sobic006G226000 Sobic001G136400 Sobic001G136400 Sobic002G055800--Sobic001G136400 Sobic001G366300 Sobic001G366300 Sobic002G055800--Sobic001G366300 Sobic003G001800 Sobic003G001800 Sobic002G055800--Sobic003G001800 Sobic009G012500 Sobic009G012500 Sobic002G055800--Sobic009G012500 Sobic006G083900 Sobic006G083900 Sobic002G055800--Sobic006G083900 Sobic002G055800--Sobic002G240000 Sobic004G142400 Sobic004G142400 Sobic002G055800--Sobic004G142400 Sobic007G192200--Sobic005G036200 Sobic007G192200--Sobic006G135800 Sobic003G140800 Sobic003G140800 Sobic007G192200--Sobic003G140800 Sobic007G192200--Sobic009G002200 Sobic007G192200--Sobic006G226000 Sobic007G192200--Sobic009G012600 Sobic007G192200--Sobic004G242200 Sobic005G102800 Sobic005G102800 Sobic007G192200--Sobic005G102800 Sobic009G031800 Sobic009G031800 Sobic007G192200--Sobic009G031800 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic009G002200--Sobic006G135800 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic009G012600--Sobic007G050800 Sobic005G045700 Sobic005G045700 Sobic009G012600--Sobic005G045700 Sobic009G012600--Sobic006G226000 Sobic009G012600--Sobic007G192200 Sobic009G012600--Sobic009G002200 Sobic009G012600--Sobic005G036200 Sobic009G012600--Sobic010G037901 Sobic009G012600--Sobic006G262501 Sobic008G191850 Sobic008G191850 Sobic009G012600--Sobic008G191850
Octagon: transcription factors


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