Gene annotation
Transcriptome id Sobic.009G002200.1
Synonym ATFH1, FH1, Sb09g000410, AHF1, AFH1
Functional annotation formin-like protein 1 precursor, putative, expressed
UniProt C5YXZ0
Pfam PF02181
Panther DB PTHR23213 PTHR23213:SF250
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25500 : formin homology 1
RAP-DB (Rice) LOC_Os05g01350.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a041007
Brachypodium KQK08133
Barley HORVU3Hr1G089510.1 , HORVU1Hr1G002300.8 , HORVU1Hr1G002300.1
Wheat TraesCS1B02G414300 , TraesCS3D02G391800
Populus -


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cDNA sequences
Sobic.009G002200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
2 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.004G282601 - -
4 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.005G036200 protein of unknown function containing protein, expressed -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.001G375800 expressed protein -
8 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
9 Sobic.010G037901 - -
10 Sobic.002G112000 protein binding protein, putative, expressed -
11 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
12 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
13 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
14 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
16 Sobic.008G118100 kelch repeat protein, putative, expressed -
17 Sobic.005G157300 protein binding protein, putative, expressed -
18 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
19 Sobic.006G221300 expressed protein -
20 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic009G002200 Sobic009G002200 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic008G118100 Sobic008G118100 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic002G168000 Sobic002G168000 Sobic007G050800--Sobic002G168000 Sobic007G050800--Sobic005G153000 Sobic007G050800--Sobic006G135800 Sobic007G187700 Sobic007G187700 Sobic007G050800--Sobic007G187700 Sobic009G012600 Sobic009G012600 Sobic007G050800--Sobic009G012600 Sobic003G290400--Sobic005G153000 Sobic003G290400--Sobic009G002200 Sobic003G290400--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic003G290400--Sobic009G077300 Sobic006G221300 Sobic006G221300 Sobic003G290400--Sobic006G221300 Sobic002G027600 Sobic002G027600 Sobic003G290400--Sobic002G027600 Sobic003G290400--Sobic006G135800 Sobic007G162400 Sobic007G162400 Sobic003G290400--Sobic007G162400 Sobic003G259300 Sobic003G259300 Sobic003G290400--Sobic003G259300 Sobic004G282601--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic004G282601--Sobic001G104500 Sobic004G282601--Sobic010G037901 Sobic004G282601--Sobic009G077300 Sobic004G282601--Sobic009G002200 Sobic004G282601--Sobic007G187700 Sobic004G282601--Sobic003G290400 Sobic004G282601--Sobic006G221300 Sobic005G196600 Sobic005G196600 Sobic004G282601--Sobic005G196600 Sobic001G493100 Sobic001G493100 Sobic006G135800--Sobic001G493100 Sobic006G135800--Sobic010G037901 Sobic006G135800--Sobic006G226000 Sobic006G172000 Sobic006G172000 Sobic006G135800--Sobic006G172000 Sobic006G135800--Sobic009G002200 Sobic006G135800--Sobic005G153000 Sobic007G192200 Sobic007G192200 Sobic006G135800--Sobic007G192200 Sobic009G031800 Sobic009G031800 Sobic006G135800--Sobic009G031800 Sobic007G160400 Sobic007G160400 Sobic006G135800--Sobic007G160400 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic004G242200 Sobic004G242200 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G153000--Sobic005G196600 Sobic001G375800--Sobic005G036200 Sobic001G375800--Sobic001G456400 Sobic001G375800--Sobic009G002200 Sobic001G375800--Sobic002G420400 Sobic010G033500 Sobic010G033500 Sobic001G375800--Sobic010G033500 Sobic001G375800--Sobic004G242200 Sobic003G379900 Sobic003G379900 Sobic001G375800--Sobic003G379900 Sobic001G485200 Sobic001G485200 Sobic001G375800--Sobic001G485200 Sobic004G339900 Sobic004G339900 Sobic001G375800--Sobic004G339900 Sobic002G335500 Sobic002G335500 Sobic004G078500--Sobic002G335500 Sobic002G006100 Sobic002G006100 Sobic004G078500--Sobic002G006100 Sobic004G078500--Sobic009G002200 Sobic002G112000 Sobic002G112000 Sobic004G078500--Sobic002G112000 Sobic005G018050 Sobic005G018050 Sobic004G078500--Sobic005G018050 Sobic001G081800 Sobic001G081800 Sobic004G078500--Sobic001G081800 Sobic004G078500--Sobic003G259300 Sobic004G078500--Sobic003G290400 Sobic001G465500 Sobic001G465500 Sobic004G078500--Sobic001G465500 Sobic010G037901--Sobic005G196600 Sobic010G037901--Sobic006G226000 Sobic003G086800 Sobic003G086800 Sobic010G037901--Sobic003G086800 Sobic010G037901--Sobic009G031800 Sobic009G188600 Sobic009G188600 Sobic010G037901--Sobic009G188600 Sobic010G037901--Sobic005G153000 Sobic010G037901--Sobic006G135800 Sobic010G037901--Sobic007G160400 Sobic010G037901--Sobic004G282601
Octagon: transcription factors


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