Gene annotation
Transcriptome id Sobic.004G078500.3,Sobic.004G078500.2,Sobic.004G078500.1
Synonym SRF8, Sb04g006475
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A1Z5RLD7 , A0A194YNA1
Pfam PF00069 PF13855 PF13855 PF00069
Panther DB PTHR27001:SF169 PTHR27001 PTHR27001 PTHR27001:SF169
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation GO:0005515protein binding GO:0005515protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G22130 : STRUBBELIG-receptor family 8
RAP-DB (Rice) LOC_Os02g10110.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) Zm00025a034671
Brachypodium PNT76103 , KQJ93837 , PNT66094
Barley HORVU6Hr1G041480.2 , HORVU6Hr1G041480.1 , HORVU6Hr1G033610.9 , HORVU6Hr1G033610.8 , HORVU6Hr1G033610.3 , HORVU6Hr1G033610.2 , HORVU6Hr1G033610.1 , HORVU6Hr1G033610.7 , HORVU6Hr1G033610.6 , HORVU6Hr1G033610.5 , HORVU6Hr1G033610.4
Wheat TraesCS6B02G193500 , TraesCS6B02G193500 , TraesCS6A02G166100 , TraesCS6D02G154700 , TraesCS6D02G154700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G335500 OsFBX255 - F-box domain containing protein, expressed -
2 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
4 Sobic.002G112000 protein binding protein, putative, expressed -
5 Sobic.005G018050 - -
6 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
7 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.001G465500 radical SAM enzyme, putative, expressed -
10 Sobic.002G343000 expressed protein -
11 Sobic.008G118100 kelch repeat protein, putative, expressed -
12 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
13 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
14 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
15 Sobic.010G190800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1680 domain containing protein, putative, expressed K09955: uncharacterized protein
16 Sobic.002G187600 expressed protein -
17 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
18 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
19 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
20 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic004G078500 Sobic004G078500 Sobic002G335500 Sobic002G335500 Sobic004G078500--Sobic002G335500 Sobic002G006100 Sobic002G006100 Sobic004G078500--Sobic002G006100 Sobic009G002200 Sobic009G002200 Sobic004G078500--Sobic009G002200 Sobic002G112000 Sobic002G112000 Sobic004G078500--Sobic002G112000 Sobic005G018050 Sobic005G018050 Sobic004G078500--Sobic005G018050 Sobic001G081800 Sobic001G081800 Sobic004G078500--Sobic001G081800 Sobic003G259300 Sobic003G259300 Sobic004G078500--Sobic003G259300 Sobic003G290400 Sobic003G290400 Sobic004G078500--Sobic003G290400 Sobic001G465500 Sobic001G465500 Sobic004G078500--Sobic001G465500 Sobic002G335500--Sobic004G078500 Sobic002G335500--Sobic001G081800 Sobic002G196500 Sobic002G196500 Sobic002G335500--Sobic002G196500 Sobic001G005800 Sobic001G005800 Sobic002G335500--Sobic001G005800 Sobic002G335500--Sobic009G002200 Sobic002G335500--Sobic003G259300 Sobic002G335500--Sobic002G006100 Sobic004G145300 Sobic004G145300 Sobic002G335500--Sobic004G145300 Sobic002G335500--Sobic001G465500 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic005G153000 Sobic005G153000 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic009G057800 Sobic009G057800 Sobic002G112000--Sobic009G057800 Sobic007G201900 Sobic007G201900 Sobic002G112000--Sobic007G201900 Sobic002G317700 Sobic002G317700 Sobic002G112000--Sobic002G317700 Sobic008G070700 Sobic008G070700 Sobic002G112000--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic002G112000--Sobic010G222800 Sobic003G129500 Sobic003G129500 Sobic002G112000--Sobic003G129500 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic002G112000--Sobic009G002200 Sobic008G041900 Sobic008G041900 Sobic005G018050--Sobic008G041900 Sobic005G018050--Sobic002G006100 Sobic002G343000 Sobic002G343000 Sobic005G018050--Sobic002G343000 Sobic008G022200 Sobic008G022200 Sobic005G018050--Sobic008G022200 Sobic005G018050--Sobic009G002200 Sobic005G018050--Sobic004G078500 Sobic005G018050--Sobic009G225500 Sobic005G018050--Sobic006G272800 Sobic005G018050--Sobic003G290400 Sobic002G238800 Sobic002G238800 Sobic001G081800--Sobic002G238800 Sobic006G143300 Sobic006G143300 Sobic001G081800--Sobic006G143300 Sobic001G081800--Sobic002G335500 Sobic002G354800 Sobic002G354800 Sobic001G081800--Sobic002G354800 Sobic005G164800 Sobic005G164800 Sobic001G081800--Sobic005G164800 Sobic001G081800--Sobic002G343000 Sobic001G171100 Sobic001G171100 Sobic001G081800--Sobic001G171100 Sobic005G033700 Sobic005G033700 Sobic001G081800--Sobic005G033700 Sobic003G379900 Sobic003G379900 Sobic001G081800--Sobic003G379900 Sobic003G259300--Sobic001G425700 Sobic003G259300--Sobic009G225500 Sobic003G259300--Sobic002G006100 Sobic009G127800 Sobic009G127800 Sobic003G259300--Sobic009G127800 Sobic003G259300--Sobic006G272800 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic003G290400--Sobic005G153000 Sobic003G290400--Sobic009G002200 Sobic003G290400--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic003G290400--Sobic009G077300 Sobic006G221300 Sobic006G221300 Sobic003G290400--Sobic006G221300 Sobic003G290400--Sobic002G027600 Sobic003G290400--Sobic006G135800 Sobic007G162400 Sobic007G162400 Sobic003G290400--Sobic007G162400 Sobic003G290400--Sobic003G259300 Sobic008G078000 Sobic008G078000 Sobic001G465500--Sobic008G078000 Sobic001G465500--Sobic002G335500 Sobic001G465500--Sobic004G078500 Sobic003G028400 Sobic003G028400 Sobic001G465500--Sobic003G028400 Sobic002G208400 Sobic002G208400 Sobic001G465500--Sobic002G208400 Sobic004G030400 Sobic004G030400 Sobic001G465500--Sobic004G030400 Sobic003G331000 Sobic003G331000 Sobic001G465500--Sobic003G331000 Sobic003G129300 Sobic003G129300 Sobic001G465500--Sobic003G129300 Sobic001G436300 Sobic001G436300 Sobic001G465500--Sobic001G436300
Octagon: transcription factors


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